PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021685650.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 338aa MW: 37918.7 Da PI: 6.1746

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021685650.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	63.3	4.7e-20	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lvd+++++G ++W++ +r g++R++k+c++rw +yl XP_021685650.1 14 KGPWTPEEDQKLVDYIQKHGHRSWRALPRLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	54.9	2e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++ lG++ W++Ia++++ gRt++++k++w+++l XP_021685650.1 67 RGKFSQEEEQTILNLHSVLGNK-WSAIASHLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence
MGRSPCCDEN GLKKGPWTPE EDQKLVDYIQ KHGHRSWRAL PRLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SQEEEQTILN LHSVLGNKWS AIASHLPGRT DNEIKNFWNT HLKKKLIQMG 120 FDPMTHQPRT DIFASLPHLM ALLNLKDFMD QHPLDEHAMR LQAEAVQLAK LQYLQYLLQS 180 ATSIPSNSYG QNGITDMEIL NLLNQIPAMK ETPLLNSSQL ENPASSYPFG LATSQPLHYS 240 NLLPQLSDPQ VPFNYQPSLN SEMGQAAVLT TMFNEGDNNN PSDSSWVLPS PTPSLPPTIT 300 ETISNPGDAS STTSSYGGGT SSYWSEFFLD DSIMQEIS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34670.1	1e-103	MYB family protein