PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021685621.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 329aa MW: 36971.8 Da PI: 6.9892

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021685621.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	60.7	3.2e-19	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lvd++++ G g+W+t ++ g++R++k+c++rw +yl XP_021685621.1 14 KGPWTPEEDEKLVDYINRNGHGSWRTLPKLAGLNRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	55.9	9.5e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE+ l+v+++ lG++ W++Ia +++ gRt++++k++w++++ XP_021685621.1 67 RGKFSEEEERLIVNLHSVLGNK-WSRIATHLP-GRTDNEIKNFWNTHM 112 89******************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 329 aa Download sequence
MVRSPCCFDS SLKKGPWTPE EDEKLVDYIN RNGHGSWRTL PKLAGLNRCG KSCRLRWTNY 60 LRPDIKRGKF SEEEERLIVN LHSVLGNKWS RIATHLPGRT DNEIKNFWNT HMRKKLLQMG 120 IDPNTHKPRA DLNHLLNLSA LLFGNLTSPW NNIVKLQADA THLTNIRLLH NLLQQIMNTS 180 TFPGVTVSAG TQNLNPLEQL LNKTATTSLY TNEPFARSED LPSQAPTIGV IDNANLWASL 240 EGELLGLNME NNNLIMNSCC DIQTGNPLRH QLVPASNSSS NGTSMVNQME SNANPLNDVV 300 DSWDKLIDDD SFWKDIQDLT SFSQSPASC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	2e-80	MYB family protein