PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021685544.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | SRS | ||||||||
Protein Properties | Length: 325aa MW: 34946.6 Da PI: 7.0501 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 201.7 | 2.1e-62 | 105 | 248 | 2 | 154 |
DUF702 2 rsgtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasaaeaaskrkrel.kskkqsalsstklssae 95 +sg++sCqdCGnqakkdC ++RCRtCCksrgf+C+thvkstWvpa+krrerqqql a+ +++++++ + + +++++l ++ ++s+l++ +l+++ XP_021685544.1 105 SSGGMSCQDCGNQAKKDCIYMRCRTCCKSRGFECQTHVKSTWVPASKRRERQQQLDALPHQQQQQQLQLRGENPKRLrENPSSSSLACPRLPTN- 198 5789*****************************************************9999988885555555555412244555566665554. PP DUF702 96 skkeletsslPeevsseavfrcvrvssvdd.geeelaYqtavsigGhvfkGiLydqGlee 154 +evss+avfrcvrvs++d+ +++++aYqtav+igGh+fkGiLyd+G+e+ XP_021685544.1 199 ----------ASEVSSPAVFRCVRVSGIDEnDDDQYAYQTAVNIGGHLFKGILYDHGPES 248 ..........358****************966788***********************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 325 aa Download sequence |
MAGLFSLGGG GGGGGGVRGS NQDDQNNNPP TEIPQESWFL YKNEDIPYKG FELWQQQEFL 60 HQRHQNQQQD LYSSAAGLGV GTSRSSINVS DEPSSRSAFV MMRSSSGGMS CQDCGNQAKK 120 DCIYMRCRTC CKSRGFECQT HVKSTWVPAS KRRERQQQLD ALPHQQQQQQ LQLRGENPKR 180 LRENPSSSSL ACPRLPTNAS EVSSPAVFRC VRVSGIDEND DDQYAYQTAV NIGGHLFKGI 240 LYDHGPESTY MPAAETSSAG ASGGFQPPNL ITAGTATASA AISPTGGVTS ASSSAAVAFM 300 DPSSLFPTPL NTFVAGTPFF PNPRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G51060.1 | 5e-75 | SRS family protein |