PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021685375.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 303aa MW: 34455.2 Da PI: 4.3639

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021685375.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.3	5.4e-18	80	134	3	57
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 k+++++++q++ Le+ Fe ++++ e++ +LAk+lgL+ rqV +WFqNrRa+ k+ XP_021685375.1 80 KKRRLKASQVQFLERNFEVENKLEPERKIQLAKELGLQPRQVAIWFQNRRARFKN 134 4568999*********************************************995 PP
2	HD-ZIP_I/II	123.9	7.3e-40	80	170	2	92
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kkrrl++ qv++LE++Fe e+kLeperK +la+eLglqprqva+WFqnrRAR+k+kqlEkdy++Lk++yd+lk + ++L ke+e+L++el XP_021685375.1 80 KKRRLKASQVQFLERNFEVENKLEPERKIQLAKELGLQPRQVAIWFQNRRARFKNKQLEKDYDSLKTSYDRLKVDYDNLLKEKENLKNELV 170 9**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MAGDQVCDGS NMSVSLQIDN PSRDSLWIPT SSIAFYGAKS MVNFENDGGG DTFDKPFFQA 60 SVKEENGDED FDVCLNPPGK KRRLKASQVQ FLERNFEVEN KLEPERKIQL AKELGLQPRQ 120 VAIWFQNRRA RFKNKQLEKD YDSLKTSYDR LKVDYDNLLK EKENLKNELV SLKAKLLASE 180 EGIENLEPIE AMNSPNVELQ NPVPKTVPEV VSDASLRVTP KQEEASSAKS DVFDSDSPHS 240 FLEPGDSSHI FEPDQSDFSQ DEEDELSRSF LPTPYFPKLY HDPPANSCSY GFPVEDQPFW 300 PWT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	85	KKRRLK
2	128	136	RRARFKNKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	8e-39	HD-ZIP family protein