PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021685011.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family NF-YA
Protein Properties Length: 330aa    MW: 35997.1 Da    PI: 9.7416
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021685011.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA103.91.5e-32181237158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++Il+RR++Rakle+++kl  ksrkpylheSRh hAl+R RgsgGrF
  XP_021685011.1 181 DGPIYVNAKQYHGILRRRKSRAKLEAQNKL-VKSRKPYLHESRHLHALNRVRGSGGRF 237
                     57****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MAVRIQNLPK KNFGQAPFTF SSPSWWHSNE QQISQSLSKN IGLKVESPSQ LYHKAKHFGF  60
QLLDQESSST QSIGQSHNEV GTVGETNSQD QCISSESGQD EGCGNGAEGR MKPVFLFSTP  120
EIALNTSQTD DSHSMARAPF PNADNYFSGL FTPYGPQAIL GSQMVGMTTA RVPLPLDLAD  180
DGPIYVNAKQ YHGILRRRKS RAKLEAQNKL VKSRKPYLHE SRHLHALNRV RGSGGRFLST  240
KRLQQSNPTS TGNVHVIPDT IQLHQRNETS ELESYRSRIG QSGTSSTCSG ITNVSSGAAI  300
FRQADHRFSS LATHMGGSMQ TSGGLVCSGT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.17e-49NF-YA family protein