PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683902.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

SRS

Protein Properties

Length: 277aa MW: 30215.2 Da PI: 8.4152

Description

SRS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683902.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF702	187.6	4.7e-58	73	234	4	154
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrelkskkqsalsstklssaes 96 + C+dCGn+akk+C+++RCRtCCk rg+dCa h+kstWvpaa+rrer+ + + ++ + a+ +kr+re+ +++++s ++s++++ XP_021683902.1 73 SSRVCRDCGNRAKKECEYRRCRTCCKGRGYDCAPHIKSTWVPAARRRERHGTDGGGGAGGSSGSssAAGGNKRPREN---VTTTSNSFSISNNNA 164 5678*******************************************8887766554444332266667777776...333334444444444 PP DUF702 97 kkeletss............lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++ + lP++++++avfrcvrv++++ ge+e+aYq+ v+i+GhvfkG+LydqG++e XP_021683902.1 165 AAAFSIDNasnyqdasfkqsLPSQIRAPAVFRCVRVTTINGGEAEVAYQAMVNISGHVFKGFLYDQGIDE 234 44443333335555556667*********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 277 aa Download sequence
MLGLHNIFLI TPPPPSSSFH HSDQQPISIH DQCNIPNNQD SWTTFKRYNQ QESSFGKRDA 60 LNVDEDNENS NSSSRVCRDC GNRAKKECEY RRCRTCCKGR GYDCAPHIKS TWVPAARRRE 120 RHGTDGGGGA GGSSGSSSAA GGNKRPRENV TTTSNSFSIS NNNAAAAFSI DNASNYQDAS 180 FKQSLPSQIR APAVFRCVRV TTINGGEAEV AYQAMVNISG HVFKGFLYDQ GIDEKNLFSC 240 ISKMPSSGRN RDSTSPIVDP PDAYPASATH RLLQGNE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12330.1	6e-45	SRS family protein