PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021683901.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | SRS | ||||||||
Protein Properties | Length: 278aa MW: 30286.3 Da PI: 8.4152 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 187.6 | 4.7e-58 | 73 | 234 | 4 | 154 |
DUF702 4 gtasCqdCGnqakkdCaheRCRtCCksrgfdCathvkstWvpaakrrerqqqlaaasskaaasa..aeaaskrkrelkskkqsalsstklssaes 96 + C+dCGn+akk+C+++RCRtCCk rg+dCa h+kstWvpaa+rrer+ + + ++ + a+ +kr+re+ +++++s ++s++++ XP_021683901.1 73 SSRVCRDCGNRAKKECEYRRCRTCCKGRGYDCAPHIKSTWVPAARRRERHGTDGGGGAGGSSGSssAAGGNKRPREN---VTTTSNSFSISNNNA 164 5678*********************************************8887766554444332266667777776...333334444444444 PP DUF702 97 kkeletss............lPeevsseavfrcvrvssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 +++ + lP++++++avfrcvrv++++ ge+e+aYq+ v+i+GhvfkG+LydqG++e XP_021683901.1 165 AAAFSIDNasnyqdasfkqsLPSQIRAPAVFRCVRVTTINGGEAEVAYQAMVNISGHVFKGFLYDQGIDE 234 44443333335555556667***********************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 278 aa Download sequence |
MLGLHNIFLI TPPPPSSSFH HSDQQPISIH DQCNIPNNQD SWTTFKRYNQ QESSFGKRDA 60 LNVDEDNENS NSSSRVCRDC GNRAKKECEY RRCRTCCKGR GYDCAPHIKS TWVPAARRRE 120 RHGTDGGGGA GGSSGSSSAA GGNKRPRENV TTTSNSFSIS NNNAAAAFSI DNASNYQDAS 180 FKQSLPSQIR APAVFRCVRV TTINGGEAEV AYQAMVNISG HVFKGFLYDQ GIDEKNLFSC 240 ISKMPSSGRN RDSTSPIVDP PDAYPASATH RLLQAGNE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12330.1 | 6e-45 | SRS family protein |