PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021683823.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 530aa MW: 58442.4 Da PI: 9.8703

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021683823.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.2e-05	64	86	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_021683823.1 64 FICEICNKGFQRDQNLQLHRRGH 86 89*******************88 PP
2	zf-C2H2	11.8	0.00076	140	162	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H + + XP_021683823.1 140 WKCEKCSKKYAVQSDWKAHSKIC 162 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 530 aa Download sequence
MMSEDGFSVP SSIRGFVLRE QTPNPNPNPT ANLVKKKRNL PGTPDPDAEV IALSPKSLMA 60 TNRFICEICN KGFQRDQNLQ LHRRGHNLPW KLKQRSTKEV RKKVYICPEK SCVHHDPSRA 120 LGDLTGIKKH YSRKHGEKKW KCEKCSKKYA VQSDWKAHSK ICGTREYRCD CGTLFSRKDS 180 FITHRAFCDA LAEESARFTS VSAAINANFR SDLINGAPNS NHHQSTGISQ FSSVFRPEFA 240 PGSELVADLS IVDGQKPRLP IWLDHANPQM NPINSNAFLA PNSACLPELV QTPQMNTFGS 300 ASSQSQWLGK YQEAPFTGGS NLSMSALPRG LKEEEGNKGD LSESITSLYS SNQHQQQRNS 360 AHMSATALLQ KAAQMGSTRS NPAFSTGNGI SLMNSPSLSN ASNFHSYDQS KSPETRKFLS 420 RQPNQAAENF NELANSLSPS TPAPFVGDSN SRSILGTNNA TKNLNHLMMQ SNRKQNHGSS 480 SEVEGSLTRD FLGVGGETRR PFLQQELAKF ASMSSVMDLS QYSSGHRSLS

Sequence ? help Back to Top

Protein Sequence Length: 530 aa Download sequence

MMSEDGFSVP SSIRGFVLRE QTPNPNPNPT ANLVKKKRNL PGTPDPDAEV IALSPKSLMA  60
TNRFICEICN KGFQRDQNLQ LHRRGHNLPW KLKQRSTKEV RKKVYICPEK SCVHHDPSRA  120
LGDLTGIKKH YSRKHGEKKW KCEKCSKKYA VQSDWKAHSK ICGTREYRCD CGTLFSRKDS  180
FITHRAFCDA LAEESARFTS VSAAINANFR SDLINGAPNS NHHQSTGISQ FSSVFRPEFA  240
PGSELVADLS IVDGQKPRLP IWLDHANPQM NPINSNAFLA PNSACLPELV QTPQMNTFGS  300
ASSQSQWLGK YQEAPFTGGS NLSMSALPRG LKEEEGNKGD LSESITSLYS SNQHQQQRNS  360
AHMSATALLQ KAAQMGSTRS NPAFSTGNGI SLMNSPSLSN ASNFHSYDQS KSPETRKFLS  420
RQPNQAAENF NELANSLSPS TPAPFVGDSN SRSILGTNNA TKNLNHLMMQ SNRKQNHGSS  480
SEVEGSLTRD FLGVGGETRR PFLQQELAKF ASMSSVMDLS QYSSGHRSLS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	91	103	KLKQRSTKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	1e-108	C2H2 family protein