PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021682969.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NF-YA

Protein Properties

Length: 351aa MW: 38289 Da PI: 8.4982

Description

NF-YA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021682969.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CBFB_NFYA	102.5	4e-32	175	231	1	58
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep+YVNaKQyq+Il+RRq+Rak+e ekkl +k rkpylheSRh+hA+rR+Rg+gGrF XP_021682969.1 175 QEPVYVNAKQYQGILRRRQARAKAEVEKKL-IKVRKPYLHESRHQHAMRRARGTGGRF 231 69**************************.************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MQSKPVSANQ LEPDPRVIQP YAVHSEPWWR SVSCNTVPPA VLGENATNLS SSNGPNGSLS 60 NDDQSLSNER LNEDDDDGVS KESQATASSR SVVNSGQEHR NMHHVASSVT LLHDESLTHP 120 PQLELVGHSI ACASNPYQDP YYGGMMAAYG HQPLSYPHVI AMHHPRMPLP HEIAQEPVYV 180 NAKQYQGILR RRQARAKAEV EKKLIKVRKP YLHESRHQHA MRRARGTGGR FAKKTHADAS 240 KNTTERKVND SGPVPSSQSG SSSGSEPLPS DSAEVWIFPR GQQEGRGAPQ VHGTSEAKNH 300 VNGGTFHHNI NGLQTSTHHS HSGEKGEGDC SGQQRGSISS NQASRRPLSI Q

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MQSKPVSANQ LEPDPRVIQP YAVHSEPWWR SVSCNTVPPA VLGENATNLS SSNGPNGSLS  60
NDDQSLSNER LNEDDDDGVS KESQATASSR SVVNSGQEHR NMHHVASSVT LLHDESLTHP  120
PQLELVGHSI ACASNPYQDP YYGGMMAAYG HQPLSYPHVI AMHHPRMPLP HEIAQEPVYV  180
NAKQYQGILR RRQARAKAEV EKKLIKVRKP YLHESRHQHA MRRARGTGGR FAKKTHADAS  240
KNTTERKVND SGPVPSSQSG SSSGSEPLPS DSAEVWIFPR GQQEGRGAPQ VHGTSEAKNH  300
VNGGTFHHNI NGLQTSTHHS HSGEKGEGDC SGQQRGSISS NQASRRPLSI Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G12840.1	1e-72	NF-YA family protein