PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021682599.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | E2F/DP | ||||||||
Protein Properties | Length: 347aa MW: 38514.9 Da PI: 7.1443 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 79 | 4.3e-25 | 182 | 246 | 2 | 71 |
E2F_TDP 2 keksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 +++sL++lt+kf+kl++++++g+++ln a+ L +v + RRiYDi+NVLe++ liek++kn+i w+g XP_021682599.1 182 YDSSLGILTKKFVKLIQEAKDGTLDLNRTADVL---EV--QTRRIYDITNVLEGIALIEKTSKNNIWWRG 246 689******************************...99..****************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 347 aa Download sequence |
MANSSEDTTT ATPHPSQFHF QLLHSHSHFL NQYQSSPSFS FSTSPKPHLP LSSSSLASSN 60 TNNNNNRLSN IIPLAFQLHA SDSHSAFGKL AIGLSLLHQG RGLVAVKLKQ NNEKHNHEAQ 120 YTGQATIPSD SKLVADNSLD PQSATGTKHN SRSKVPKNAK LGTQRSNAES LNGLNPATGC 180 QYDSSLGILT KKFVKLIQEA KDGTLDLNRT ADVLEVQTRR IYDITNVLEG IALIEKTSKN 240 NIWWRGYDGC GPKDLDNHVT RLKVSLRTEV ESLHADEHRL DESIREKQEL LRILEEDENN 300 KRHLFLKEED ITSLPCFQNQ MLIAIKALQA SYLEVPDPDG GHWSSSV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G47870.2 | 3e-74 | E2F/DP family protein |