PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021682507.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 379aa MW: 42024.2 Da PI: 8.432

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021682507.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.5	0.00022	141	164	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F + +L++H+ H XP_021682507.1 141 FPCTACGEIFQKPQLLEQHQAIkH 164 89******************9877 PP

Sequence ? help Back to Top
Protein Sequence Length: 379 aa Download sequence
MAGIVSVFNK FLSIFILLLN LGCFIFTAKD HQPPTKKRKV SLLSPTSSSP SRLKPYRALS 60 SSWSYLKRIF SAKADKITSS QAQSPVTTLT SARSSQQSIV SMIPPEDHSS DIPPRKKTSG 120 SCEESDISTN DQFFPLRNDI FPCTACGEIF QKPQLLEQHQ AIKHAVSELL DGDSGKNIVH 180 IIFKTGWSCK EKNPEIHRIL KIHNSPKILS KFEEYRELVK AKAARNGGAK RRDERCIADG 240 NELLRFYCST FMCDLGANGN SSICNQQYCS VCGIIKSGFS PKMDGISTLS SSWRAHVAIP 300 EDVEEEFKFM NVKRAMLVCR VLAGRVGCEL EEEVDKENGG FDSVVGRGGS GVHSRVDEED 360 LLVFNPRAVL PCFVIVYTA

Sequence ? help Back to Top

Protein Sequence Length: 379 aa Download sequence

MAGIVSVFNK FLSIFILLLN LGCFIFTAKD HQPPTKKRKV SLLSPTSSSP SRLKPYRALS  60
SSWSYLKRIF SAKADKITSS QAQSPVTTLT SARSSQQSIV SMIPPEDHSS DIPPRKKTSG  120
SCEESDISTN DQFFPLRNDI FPCTACGEIF QKPQLLEQHQ AIKHAVSELL DGDSGKNIVH  180
IIFKTGWSCK EKNPEIHRIL KIHNSPKILS KFEEYRELVK AKAARNGGAK RRDERCIADG  240
NELLRFYCST FMCDLGANGN SSICNQQYCS VCGIIKSGFS PKMDGISTLS SSWRAHVAIP  300
EDVEEEFKFM NVKRAMLVCR VLAGRVGCEL EEEVDKENGG FDSVVGRGGS GVHSRVDEED  360
LLVFNPRAVL PCFVIVYTA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G29660.1	1e-107	C2H2 family protein