PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021682200.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 220aa    MW: 25011.6 Da    PI: 7.5155
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021682200.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.22.1e-28959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    k+i+n++ rqvtfskRr g++KKA+ELS+LCdae+a+i+fs tgkl+ey+s
  XP_021682200.1  9 KKIDNNTARQVTFSKRRRGLFKKAYELSTLCDAEIALIVFSATGKLFEYAS 59
                    68***********************************************86 PP
2K-box53.31.2e-18921721999
           K-box  19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                       +a L ke+e+   e+R++ Ge+L+ Ls++eLqqLe+ Le++lk++ ++K++++ ++i+ l+ k  +l een++L+k+++
  XP_021682200.1  92 GTFAALSKEVEERTLELRQMRGEELQGLSIEELQQLERLLERGLKRVVETKSDVFAKEINALKSKGAQLMEENERLKKQMM 172
                     567789999999999***************************************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MTRQKIQIKK IDNNTARQVT FSKRRRGLFK KAYELSTLCD AEIALIVFSA TGKLFEYASS  60
SVNQVIERHK LHPKNVGNKL DQPSLDQQLE DGTFAALSKE VEERTLELRQ MRGEELQGLS  120
IEELQQLERL LERGLKRVVE TKSDVFAKEI NALKSKGAQL MEENERLKKQ MMDIPVARMQ  180
LFEAGQPSDS VMTNTSSSAD PAQDFEGSYT FLRLGLPFPD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22540.13e-74MIKC_MADS family protein