PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021682199.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 220aa MW: 25011.6 Da PI: 7.5155 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 89.2 | 2.1e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n++ rqvtfskRr g++KKA+ELS+LCdae+a+i+fs tgkl+ey+s XP_021682199.1 9 KKIDNNTARQVTFSKRRRGLFKKAYELSTLCDAEIALIVFSATGKLFEYAS 59 68***********************************************86 PP | |||||||
2 | K-box | 53.3 | 1.2e-18 | 92 | 172 | 19 | 99 |
K-box 19 qelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +a L ke+e+ e+R++ Ge+L+ Ls++eLqqLe+ Le++lk++ ++K++++ ++i+ l+ k +l een++L+k+++ XP_021682199.1 92 GTFAALSKEVEERTLELRQMRGEELQGLSIEELQQLERLLERGLKRVVETKSDVFAKEINALKSKGAQLMEENERLKKQMM 172 567789999999999***************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MTRQKIQIKK IDNNTARQVT FSKRRRGLFK KAYELSTLCD AEIALIVFSA TGKLFEYASS 60 SVNQVIERHK LHPKNVGNKL DQPSLDQQLE DGTFAALSKE VEERTLELRQ MRGEELQGLS 120 IEELQQLERL LERGLKRVVE TKSDVFAKEI NALKSKGAQL MEENERLKKQ MMDIPVARMQ 180 LFEAGQPSDS VMTNTSSSAD PAQDFEGSYT FLRLGLPFPD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 3e-74 | MIKC_MADS family protein |