PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021681786.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | bHLH | ||||||||
Protein Properties | Length: 440aa MW: 48542.9 Da PI: 8.115 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.2 | 6e-08 | 351 | 391 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+RR+ri +++ L++l+P K++ a++L +A +Y+k L XP_021681786.1 351 ARQRRERISERIRVLQRLVPGG-----SKMDTASMLDEAANYLKFL 391 69******************95.....5****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 440 aa Download sequence |
MDSLWWDDSQ VLTNTSSLWN NPQHASPLWS NQENEESLIA SNSNSCLFGG KMDRTEDIFN 60 QFQELQKLQE TTRIVANTVV AKSGADVRWG DTSTLELYSS PSINKPYATT NPTITGFGMS 120 NQSRIINGLP NEKAAGVSTA GSLESLDCLL SATNSNTNTS VEDDGISMIF SDCRNLWNYG 180 ANSAASSGES ENNTSNARNK EMHCRVGKLD ETVSQSSSDK KSSPTKPDSI KRSNNQSELK 240 VGASNKYPYF DLLQNDCSTS GGRFRLISEN PPKPKRFRLD KRPGSSNINF QQPSSSVSSS 300 IEEVDPEAIA QMKEMIYRAA AFRPVNLGLE VVEKPKRKNV RISSDPQTVA ARQRRERISE 360 RIRVLQRLVP GGSKMDTASM LDEAANYLKF LRSQVKALEN LGHKLDSVNC PPTSVAFSSL 420 PFNNHSFFSH ANSSLFTPKP |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 352 | 357 | RQRRER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G21330.1 | 1e-55 | bHLH family protein |