PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021681721.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HB-other

Protein Properties

Length: 1157aa MW: 131079 Da PI: 8.0871

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021681721.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	43.6	5.1e-14	7	55	8	56
-HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 8 tkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 ++ qle+Le+++++++yp+++++eeLA+ l+Lt +qV+ WF +R ++k XP_021681721.1 7 SPLQLEALEKFYAEQKYPTHTAMEELAAVLDLTFKQVQGWFVEKRRRDK 55 788*******************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 1157 aa Download sequence
MEMKRKSPLQ LEALEKFYAE QKYPTHTAME ELAAVLDLTF KQVQGWFVEK RRRDKSKDIS 60 IETPCPSKKL SVVKGRNGLR VAPANKKTHK QRDSLIMHAS SEAAGRILKN KRRKKKPILL 120 QNLLTPDYIL RKIFRKDGPP LGVEFVSLPL RAYHYCKDSR NSSAACEENQ SAKRRKVSKQ 180 GKLTCQDYND GASVKKHGIG KGLMTVWRAT NPNGGDFPTG IPCVDREIIP QISTPVSRKP 240 LGQQKKRRQL VSIMKQRRLE NKSQQKRKFS TKRKVESKRD ESQNQPRKEK CELALEGVLS 300 QERVDQLTLL LDDEELELRE LQAGLNPVTC SDHCANNGLH GCSLCKDLLP KFPPNSVKMK 360 QPFAKQPWDS SPETVKKLFK VFHFLYTYSV SIDICPFTLD EFAQAFHDKD SLLLGKIHLA 420 LLKLLLSDVE TEISSGFLPN LSVSCQFLAL IHSVERQEFV VEFWKKSLNP LTWTEILHQV 480 LVAAGFGSRQ GSFHREALSK EMSLMVKYGL RPGTLKGELF KLLSQRGNNG LKVSDLAKSM 540 EITELNLAKT TEELELLISS TLSSDITLFE KISPSAYRLR ISTLSKEAND FQSDTEDSGS 600 VHDDFNDSGT CSSSDSECDS DNSNSRKSKH TNHHRSKKNM LTVYNEIDES HPGEVWLLGL 660 IEGEYSDLSI EEKLNVLVAL IDLVSAGSSI RMEDVKRTTV ESVPNMHHYG SGAKIKRSSS 720 KQHNFPRPSW VHVGQVNNSK EPYSSSASHP IDSSVSILKF NEGEKSSGKG KDMKETELGV 780 NLHPMQSIFL GSDRRYSRYW LFLGPCNSRD PGHKRVYFES SEDGHWEVID TEEALRGLLS 840 ILDDRGAREA LLIESLKKRE AFLCQEMSSN MVNHAENRRL TQSDQPELDI VREDSTSPVS 900 DVDNNLSLPE VMKDSLPPCG AIILEAGKKE EEDNQKWSRL QEFDAWIWNY FYCDLNAVKR 960 VKRSYFESLT RCETCHDLYW RDEKHCRICH TTFELDFDLE ERYAIHSATC RAKRDSEMFP 1020 KHKVLSSQLQ SLKAAVHAIE SAMPDEALLG AWTKSAHRLW VKRLRRTSSL AELLQVVADF 1080 VAAINEDWLC QCDVAHDSNT SMEEIIASFP TMPQTSSALA LWLVKLDDLI SAYLESIQPG 1140 NKQESGTKCA GKDASKQ

Sequence ? help Back to Top

Protein Sequence Length: 1157 aa Download sequence

MEMKRKSPLQ LEALEKFYAE QKYPTHTAME ELAAVLDLTF KQVQGWFVEK RRRDKSKDIS  60
IETPCPSKKL SVVKGRNGLR VAPANKKTHK QRDSLIMHAS SEAAGRILKN KRRKKKPILL  120
QNLLTPDYIL RKIFRKDGPP LGVEFVSLPL RAYHYCKDSR NSSAACEENQ SAKRRKVSKQ  180
GKLTCQDYND GASVKKHGIG KGLMTVWRAT NPNGGDFPTG IPCVDREIIP QISTPVSRKP  240
LGQQKKRRQL VSIMKQRRLE NKSQQKRKFS TKRKVESKRD ESQNQPRKEK CELALEGVLS  300
QERVDQLTLL LDDEELELRE LQAGLNPVTC SDHCANNGLH GCSLCKDLLP KFPPNSVKMK  360
QPFAKQPWDS SPETVKKLFK VFHFLYTYSV SIDICPFTLD EFAQAFHDKD SLLLGKIHLA  420
LLKLLLSDVE TEISSGFLPN LSVSCQFLAL IHSVERQEFV VEFWKKSLNP LTWTEILHQV  480
LVAAGFGSRQ GSFHREALSK EMSLMVKYGL RPGTLKGELF KLLSQRGNNG LKVSDLAKSM  540
EITELNLAKT TEELELLISS TLSSDITLFE KISPSAYRLR ISTLSKEAND FQSDTEDSGS  600
VHDDFNDSGT CSSSDSECDS DNSNSRKSKH TNHHRSKKNM LTVYNEIDES HPGEVWLLGL  660
IEGEYSDLSI EEKLNVLVAL IDLVSAGSSI RMEDVKRTTV ESVPNMHHYG SGAKIKRSSS  720
KQHNFPRPSW VHVGQVNNSK EPYSSSASHP IDSSVSILKF NEGEKSSGKG KDMKETELGV  780
NLHPMQSIFL GSDRRYSRYW LFLGPCNSRD PGHKRVYFES SEDGHWEVID TEEALRGLLS  840
ILDDRGAREA LLIESLKKRE AFLCQEMSSN MVNHAENRRL TQSDQPELDI VREDSTSPVS  900
DVDNNLSLPE VMKDSLPPCG AIILEAGKKE EEDNQKWSRL QEFDAWIWNY FYCDLNAVKR  960
VKRSYFESLT RCETCHDLYW RDEKHCRICH TTFELDFDLE ERYAIHSATC RAKRDSEMFP  1020
KHKVLSSQLQ SLKAAVHAIE SAMPDEALLG AWTKSAHRLW VKRLRRTSSL AELLQVVADF  1080
VAAINEDWLC QCDVAHDSNT SMEEIIASFP TMPQTSSALA LWLVKLDDLI SAYLESIQPG  1140
NKQESGTKCA GKDASKQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	50	90	KRRRDKSKDISIETPCPSKKLSVVKGRNGLRVAPANKKTHK
2	111	136	KRRKKKPILLQNLLTPDYILRKIFRK
3	112	117	RRKKKP
4	245	274	KKRRQLVSIMKQRRLENKSQQKRKFSTKRK
5	245	270	KRRKKKPILLQNLLTPDYILRKIFRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	0.0	HB-other family protein