PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021680998.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 908aa MW: 100705 Da PI: 8.1407

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021680998.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	63.6	4.5e-20	816	896	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+ +ev++Li++r ++++r++ k +++lWee s+++ ++g+ rsp qCk+ w +l ++y++ + +k+r + +pyf++++ XP_021680998.1 816 KWKTEEVKKLIKMRGDLHDRFNVVKGRMALWEELSNNLIAEGVDRSPGQCKSLWASLVQKYEESTSDNKSR-----EGWPYFEDMD 896 7******************************************************************96.....67*****8 PP

Sequence ? help Back to Top
Protein Sequence Length: 908 aa Download sequence
MQLGVLGLSY SLYFGSTCFA ACRHKDLQNM AAFSTISLCP YSLWRRPSPR KYSISCSDGS 60 PTSIGSHGSK APRKRSGRLE GAGKSMEDSV QRKMEQFYEG SNGPPIRIVP IGGLGEIGMN 120 CMLVGNHDRY ILIDAGVMFP DYDELGVQKI IPDTTFIKRW SHKIEAVVIT HGHEDHIGAL 180 PWVIPALDSR TPIYASSFTM ELIKKRLKEN GIFVYSRLKV FRTRKKFIAG PFEVEPIRVT 240 HSIPDCCGLV LRCDDGTILH TGDWKIDESP LDGKVFDREA LEELSKEGVT LMMSDSTNVL 300 SPGRTISESV VADALTRRIS AAKGRVITTQ FASNIHRLGS VKAAADLTGR KLAFVGMSLR 360 TYLDAAWKDG KAPIDPSTLV KVEDIDAYAP KDLLIVTTGS QAEPRAALNL ASYGSSHSFK 420 LSKDDVILYS AKVIPGNESR VMKMLNRISE IGSTIVMGKN ELLHTSGHGY RGELEEILRI 480 VKPQHFLPIH GELLFLKEHE SLGKSTGIRH TTVIKNGEML GVSHLRNRRV ISNGFISLGK 540 ENLQLMYSDG DKAFGTSTEL CIDERLRIAT DGIIVVSMEI LRPQNAESLI ENTIKGKIRI 600 TTRCLWLDKG KLLDALHKAA HAALSSCPVN CPLSHMEKTV SEVLRKMVRK YSGKRPEVIA 660 IAMENPDGVL SDEIKTRLSG SSHVGVGISA LKKVVDGYPK RNRSNKMQAE SNGYMHLDYT 720 SQQNMEVDDI EVGRLPPNEE TTTTTSNLAD GVPSGSEDED DFWKSFISSS SPTDDSVQQH 780 EHVNELKEDG NMSSDDDSLA MQSSRSKPSK KVKRNKWKTE EVKKLIKMRG DLHDRFNVVK 840 GRMALWEELS NNLIAEGVDR SPGQCKSLWA SLVQKYEEST SDNKSREGWP YFEDMDKIFS 900 GFEATSAK

Sequence ? help Back to Top

Protein Sequence Length: 908 aa Download sequence

MQLGVLGLSY SLYFGSTCFA ACRHKDLQNM AAFSTISLCP YSLWRRPSPR KYSISCSDGS  60
PTSIGSHGSK APRKRSGRLE GAGKSMEDSV QRKMEQFYEG SNGPPIRIVP IGGLGEIGMN  120
CMLVGNHDRY ILIDAGVMFP DYDELGVQKI IPDTTFIKRW SHKIEAVVIT HGHEDHIGAL  180
PWVIPALDSR TPIYASSFTM ELIKKRLKEN GIFVYSRLKV FRTRKKFIAG PFEVEPIRVT  240
HSIPDCCGLV LRCDDGTILH TGDWKIDESP LDGKVFDREA LEELSKEGVT LMMSDSTNVL  300
SPGRTISESV VADALTRRIS AAKGRVITTQ FASNIHRLGS VKAAADLTGR KLAFVGMSLR  360
TYLDAAWKDG KAPIDPSTLV KVEDIDAYAP KDLLIVTTGS QAEPRAALNL ASYGSSHSFK  420
LSKDDVILYS AKVIPGNESR VMKMLNRISE IGSTIVMGKN ELLHTSGHGY RGELEEILRI  480
VKPQHFLPIH GELLFLKEHE SLGKSTGIRH TTVIKNGEML GVSHLRNRRV ISNGFISLGK  540
ENLQLMYSDG DKAFGTSTEL CIDERLRIAT DGIIVVSMEI LRPQNAESLI ENTIKGKIRI  600
TTRCLWLDKG KLLDALHKAA HAALSSCPVN CPLSHMEKTV SEVLRKMVRK YSGKRPEVIA  660
IAMENPDGVL SDEIKTRLSG SSHVGVGISA LKKVVDGYPK RNRSNKMQAE SNGYMHLDYT  720
SQQNMEVDDI EVGRLPPNEE TTTTTSNLAD GVPSGSEDED DFWKSFISSS SPTDDSVQQH  780
EHVNELKEDG NMSSDDDSLA MQSSRSKPSK KVKRNKWKTE EVKKLIKMRG DLHDRFNVVK  840
GRMALWEELS NNLIAEGVDR SPGQCKSLWA SLVQKYEEST SDNKSREGWP YFEDMDKIFS  900
GFEATSAK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63420.1	0.0	Trihelix family protein