PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021680960.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NAC

Protein Properties

Length: 398aa MW: 43715.1 Da PI: 5.7768

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021680960.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	40.2	1e-12	17	115	11	127
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkkt 105 +eel L+k + g + ++ +vi++v+ y++ P++Lp+ wy +++k a++ g Wk +g+ +++ +++ +g ++t XP_021680960.1 17 NEELF-ISLEKMMGGYPPPA-NVITDVNPYNYAPSNLPA------GIWYLIRSKEK---------GAMEVGSWKVKGEACKLFW-NSSITGWRTT 93 67777.45888888888888.99************92......23665544433.........25678*********9.999*** PP NAM 106 LvfykgrapkgektdWvmheyr 127 L +++g+ p+ +ktdWvm+ey XP_021680960.1 94 LEYFEGQVPHERKTDWVMQEYW 115 *******************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MHPPIAPVPE IAVDFTNEEL FISLEKMMGG YPPPANVITD VNPYNYAPSN LPAGIWYLIR 60 SKEKGAMEVG SWKVKGEACK LFWNSSITGW RTTLEYFEGQ VPHERKTDWV MQEYWIMGPV 120 ENSKVKEASS LCRVFLSGEQ GPDHKKQQKK SSLHIACEIL IHSTQATVKK AHVDASSGST 180 SRPEVDGHAE TGNLAVAGEP PFNLVENPPE IDYISRGDFL ELLDLDNPAS SSSSSDDSSC 240 LTSSSDECFD SLALLQQLDS EINQHSLQKN ESCKLSLQKN ESCKLSVSAS CRPNEVVMAP 300 ASPAGSFVRV EENKPPTEEI LGTNPSLLPI LANGSKDLDN RVLQHAVRSH NAGYMDEGPS 360 NSHDVGASSS RLGPSRDGER KVAKVRTKKH KKYLCFLF

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MHPPIAPVPE IAVDFTNEEL FISLEKMMGG YPPPANVITD VNPYNYAPSN LPAGIWYLIR  60
SKEKGAMEVG SWKVKGEACK LFWNSSITGW RTTLEYFEGQ VPHERKTDWV MQEYWIMGPV  120
ENSKVKEASS LCRVFLSGEQ GPDHKKQQKK SSLHIACEIL IHSTQATVKK AHVDASSGST  180
SRPEVDGHAE TGNLAVAGEP PFNLVENPPE IDYISRGDFL ELLDLDNPAS SSSSSDDSSC  240
LTSSSDECFD SLALLQQLDS EINQHSLQKN ESCKLSLQKN ESCKLSVSAS CRPNEVVMAP  300
ASPAGSFVRV EENKPPTEEI LGTNPSLLPI LANGSKDLDN RVLQHAVRSH NAGYMDEGPS  360
NSHDVGASSS RLGPSRDGER KVAKVRTKKH KKYLCFLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G65910.1	3e-14	NAC family protein