PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021680739.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family B3
Protein Properties Length: 390aa    MW: 45051.6 Da    PI: 7.438
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021680739.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B347.72.7e-157861398
                    TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                    +++ ++p kf++++g +   s   tl+ ++gr W v+l  +k +++ ++ +GW eFv+   +++g f+vF++ g+s+f  +v +f+
  XP_021680739.1  7 LCQQRIPEKFVKKYGDE--LSSIATLTVPNGRMWLVEL--EKVDRKLWFHNGWHEFVEYYSIRVGYFLVFRYGGESNF--NVYIFD 86
                    57889*********865..7779***************..********************************999999..998886 PP
2B3634.9e-20278370198
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     f+ +l ps+v +  +l +p +fa+++  +++    +tl+ ++g++W v++    ++g+  l+kGW eFv +n L+egD++vF+l++  +  l+v+
  XP_021680739.1 278 FKVILRPSYVYRGFLLHIPSSFARKYLTVTAF---ITLQVSDGKQWPVRC--VSGKGGAKLSKGWTEFVWENSLEEGDVCVFELINMIDIVLKVT 367
                     5667899*******************877655...9**************..88888999***********************998766667777 PP

                     EE- CS
              B3  96 vfr 98 
                     +fr
  XP_021680739.1 368 IFR 370
                     776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 390 aa     Download sequence    
MKLTLFLCQQ RIPEKFVKKY GDELSSIATL TVPNGRMWLV ELEKVDRKLW FHNGWHEFVE  60
YYSIRVGYFL VFRYGGESNF NVYIFDLAVS EISYTCNIPG SLQEPCHDNQ YIVADKRRVV  120
DNDLIEILGS GPPCHTPISS RSEFFDKYVH CNWTIAGNYE ASREKLLLRK DKYDMEEKVQ  180
SSQDIGVQVD ESELIRTADK VGLPVLGEAE GRTRRRKQRT DPIEHEPIIK QEVDEIPICT  240
STNIASETFT RRWRPVTPEE KRRTISAADK FKSDNPFFKV ILRPSYVYRG FLLHIPSSFA  300
RKYLTVTAFI TLQVSDGKQW PVRCVSGKGG AKLSKGWTEF VWENSLEEGD VCVFELINMI  360
DIVLKVTIFR VLEDAAPVNQ LPSRIMPKLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1213218TRRRKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-76B3 family protein