PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021680734.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 376aa MW: 43202.4 Da PI: 8.8713

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021680734.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	39.6	9.6e-13	10	96	6	98
..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + +++ + + l++p +f++++g++ s tl + g +W+v l k ++++++ +GW eF ++ +++g f+vF+++g+ f v++f+ XP_021680734.1 10 ILPNTIRDKKLRIPDNFVKKFGHD--LSAFGTLSVPGGPVWRVGL--IKADDKFWFHEGWPEFMDSYSIRVGYFLVFRYEGHAVF--SVHIFN 96 4566777888*********977..777889999******..9*****************************998877..888875 PP
2	B3	54.7	1.8e-17	275	364	4	97
E-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 4 vltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 vl ps+ + ++++lp fae++ +g++ ++l+ ++g++W v++ yr+++ l++GW eF +n+L egD+++F+l+++ + l+v+vf XP_021680734.1 275 VLRPSYLYRGCIMYLPSCFAEKNlNGVSG---FIKLQFSDGKQWPVRCLYRGGR--AKLSQGWYEFTLENNLGEGDVCIFELMRSIDIVLKVTVF 364 78899****************876743...59999999****665555..66**********************9876555676665 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MPRPYFYKLI LPNTIRDKKL RIPDNFVKKF GHDLSAFGTL SVPGGPVWRV GLIKADDKFW 60 FHEGWPEFMD SYSIRVGYFL VFRYEGHAVF SVHIFNLSAS EINYQSNAPS GRRYLAFEEM 120 EDDDFIEYLS SSSPCLVPNS LKSKVFDEHL GQMTINKSYN PPALQNLFHE SKLNYINWSG 180 EGNLHLSKGA SISSISHVAN QDGEIQKPKI PGRKKRKIDP NDLQPSALQE DEVEMRFRFY 240 ESSSARKRTV TAEERERAIN AAKAFEPINP FCRVVLRPSY LYRGCIMYLP SCFAEKNLNG 300 VSGFIKLQFS DGKQWPVRCL YRGGRAKLSQ GWYEFTLENN LGEGDVCIFE LMRSIDIVLK 360 VTVFHVLESA RRMIPS

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MPRPYFYKLI LPNTIRDKKL RIPDNFVKKF GHDLSAFGTL SVPGGPVWRV GLIKADDKFW  60
FHEGWPEFMD SYSIRVGYFL VFRYEGHAVF SVHIFNLSAS EINYQSNAPS GRRYLAFEEM  120
EDDDFIEYLS SSSPCLVPNS LKSKVFDEHL GQMTINKSYN PPALQNLFHE SKLNYINWSG  180
EGNLHLSKGA SISSISHVAN QDGEIQKPKI PGRKKRKIDP NDLQPSALQE DEVEMRFRFY  240
ESSSARKRTV TAEERERAIN AAKAFEPINP FCRVVLRPSY LYRGCIMYLP SCFAEKNLNG  300
VSGFIKLQFS DGKQWPVRCL YRGGRAKLSQ GWYEFTLENN LGEGDVCIFE LMRSIDIVLK  360
VTVFHVLESA RRMIPS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	208	217	PKIPGRKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-132	B3 family protein