PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021680658.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 606aa    MW: 66319.9 Da    PI: 4.7058
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021680658.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS369.25.4e-1132396062374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshl 96 
                      ++LlecA+  + ++ e+a + L +++e +s++gdp++R+a+yf+eAL +r++    +  k+l+  et+    ++ + ++k++++++P+ kf+hl
  XP_021680658.1 239 LKALLECARLAE-SEPEKAVKSLVKVRESVSEQGDPTERVASYFAEALYSRVSL---QAEKSLTIFETT---CEDFTLSYKALNDACPYSKFAHL 326
                     689******655.578888899999****************************9...888889999998...9999******************* PP

            GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     taNqaI ea+e+++++Hi+Df+i qG+QW+aLlqaLa+R++g+p ++Ri g+ +p  g   + +l +tg+rL++fA+ l+++fef++ + + +++
  XP_021680658.1 327 TANQAIIEATERASKIHIVDFGIVQGVQWAALLQALATRSAGKPaRIRISGIPAPVLGksPAASLFATGNRLRDFAKLLDLNFEFEP-ILTPIQE 420
                     ****************************************66555*********9988889999***********************.799**** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     l+ +++rv+p+E+laVn++lql++ll+e+    +   + L++ ksl+P++v++ e ea++n+  +++rf +al yysa+f+sle +l+r+s er 
  XP_021680658.1 421 LNESSFRVDPDEVLAVNFMLQLYNLLAETPVAVE---TALRMAKSLNPRIVTLGEYEASLNQVGYVNRFKNALGYYSAVFESLEPNLSRDSPERL 512
                     **************************88877777...9********************************************************* PP

            GRAS 284 kvErellgreivnvvacegae.rrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgWkdrpLvsvSaWr 374
                      vE+ llgr+i  v+  e+ae rrer e +e+Wr  +e++GF++v+ls++a++qak ll +++ s  y++ e++  ++ l Wk+ pL++vS+Wr
  XP_021680658.1 513 QVEKLLLGRRIAGVIGPEEAEtRRERVEDKEQWRVLMESCGFESVALSHYAMSQAKILLWNYNySSLYSLIESQPGFLsLAWKEVPLLTVSSWR 606
                     *****************99999*****************************************9999**9999988888**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 606 aa     Download sequence    
MAYMCADSGN LMAIAQQVIK QKQQQEQQQQ HHNHQQQQIL GINSLPLNPW PPTMSTNPNL  60
GFSGISGAAF ADPFQVPPGG DTGEPGFQFS QMDHHSTGFR FSDFGAGAAA EFDSDEWMDS  120
LMGGGDSTDS SNLPSGCDAW QNNADFGLYG PDPFTACPTR LSVACSSPSD LNRVIFSETQ  180
KSANPLQVPA WAPSPPPPPP QVVVKDAKPA NPPPPSTLKN DAIGISSSSP EIESAPPLLK  240
ALLECARLAE SEPEKAVKSL VKVRESVSEQ GDPTERVASY FAEALYSRVS LQAEKSLTIF  300
ETTCEDFTLS YKALNDACPY SKFAHLTANQ AIIEATERAS KIHIVDFGIV QGVQWAALLQ  360
ALATRSAGKP ARIRISGIPA PVLGKSPAAS LFATGNRLRD FAKLLDLNFE FEPILTPIQE  420
LNESSFRVDP DEVLAVNFML QLYNLLAETP VAVETALRMA KSLNPRIVTL GEYEASLNQV  480
GYVNRFKNAL GYYSAVFESL EPNLSRDSPE RLQVEKLLLG RRIAGVIGPE EAETRRERVE  540
DKEQWRVLME SCGFESVALS HYAMSQAKIL LWNYNYSSLY SLIESQPGFL SLAWKEVPLL  600
TVSSWR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66770.10.0GRAS family protein