PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021680019.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CO-like

Protein Properties

Length: 380aa MW: 41591.3 Da PI: 5.9668

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021680019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	29.5	1.5e-09	62	107	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ + C+ + lC C +H+ H++vp+ XP_021680019.1 62 VWVCEACERAPAAFLCKADAASLCTACDADIHSAnplarrHQRVPI 107 689***************************668999999997 PP
2	CCT	70.3	4.7e-24	311	354	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea++lRY+eK+ktRkFeK+irY+sRKa+Ae+RpR+KGrF+k++ XP_021680019.1 311 REARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRT 354 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MLKNESPGDG GGCSSNNWAR VCDTCLAAAC TVYCRADSAY LCAGCDARVH AANRVASRHE 60 RVWVCEACER APAAFLCKAD AASLCTACDA DIHSANPLAR RHQRVPILPI SGCLYGPQVG 120 PATGETTEDM FMTQEGEEGV GDEDDEAVSW LLLNPAKNSN GENNNGFLFG GGEVDEYLDL 180 VEYNSNSCGD QNQYSDQNNL QHYSVPHQKS CYGGDSVVPV QCAEAAGKDQ LHQKYHNFHL 240 GLEFESSSKA AYSYNGSISH SVSISSIDVG VVPDSTMSDA SISHPRPPKG TIDLFSSPPM 300 QMPSQLSPRD REARVLRYRE KKKTRKFEKT IRYASRKAYA ETRPRIKGRF AKRTDVEVEV 360 DQLFSTTIMA EAGYRVVPSF

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MLKNESPGDG GGCSSNNWAR VCDTCLAAAC TVYCRADSAY LCAGCDARVH AANRVASRHE  60
RVWVCEACER APAAFLCKAD AASLCTACDA DIHSANPLAR RHQRVPILPI SGCLYGPQVG  120
PATGETTEDM FMTQEGEEGV GDEDDEAVSW LLLNPAKNSN GENNNGFLFG GGEVDEYLDL  180
VEYNSNSCGD QNQYSDQNNL QHYSVPHQKS CYGGDSVVPV QCAEAAGKDQ LHQKYHNFHL  240
GLEFESSSKA AYSYNGSISH SVSISSIDVG VVPDSTMSDA SISHPRPPKG TIDLFSSPPM  300
QMPSQLSPRD REARVLRYRE KKKTRKFEKT IRYASRKAYA ETRPRIKGRF AKRTDVEVEV  360
DQLFSTTIMA EAGYRVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02380.1	1e-103	CO-like family protein