PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021679989.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 310aa    MW: 34799 Da    PI: 8.4593
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021679989.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.74.7e-172875148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT+eEdell +++k+ G ++W+t +++ g+ R++k+c++rw +yl
   XP_021679989.1 28 RGPWTPEEDELLSNYIKKEGAERWRTLPKRAGLLRCGKSCRLRWMNYL 75
                     89******************************99************97 PP
2Myb_DNA-binding48.42.2e-1581126148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rgr  ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
   XP_021679989.1  81 RGRIAPDEEDLILRLHRLLGNR-WSLIAGRIP-GRTDNEIKNYWNTHL 126
                      678889****************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MRNPSSSTSP SAKKTTATPC CSKVGIKRGP WTPEEDELLS NYIKKEGAER WRTLPKRAGL  60
LRCGKSCRLR WMNYLRPSVK RGRIAPDEED LILRLHRLLG NRWSLIAGRI PGRTDNEIKN  120
YWNTHLSKKL ISQGIDPRTH KPLNPTPNSS QFAQDLNQNS GPKSVDLEET GRTYRAIATK  180
VSKNFNITNL ERYQNPIVVE DGNGNWPNCN GLVMGLQSDQ GPSNTEYNYI GNGNEDTFSS  240
FLDSLINENE NLFMINQQNQ QQPNNMVAPS VQVQVQPIDP SAQTFNNTAL WEVEVASSMV  300
ALGDEDVALN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.11e-79MYB family protein