PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679757.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 334aa MW: 38189 Da PI: 7.7674

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679757.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51	3.2e-16	40	87	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed++l d++k +G g+W+ +++ g++R++k+c++rw++yl XP_021679757.1 40 RGAWTAIEDKILTDYIKIHGEGNWRNLPKKAGLKRCGKSCRLRWLNYL 87 89********************************************97 PP
2	Myb_DNA-binding	49.6	8.9e-16	93	136	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+ T +E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_021679757.1 93 RGNITRDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNT 136 7899****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 334 aa Download sequence
MECVRGKKRD SEVKRARERE RERKREMGRS PCCAKEGLNR GAWTAIEDKI LTDYIKIHGE 60 GNWRNLPKKA GLKRCGKSCR LRWLNYLRPG IKRGNITRDE EDLIIRLHKL LGNRWSLIAG 120 RLPGRTDNEI KNYWNTIIGK RLQNQKFPCS SHNNSFKFNQ PQHRPIQKSI SMSNANAKKV 180 FWTKASKCSK VVIPTTIGPQ NLVHDITVVP PPPSMANVSS EHHRYSEEEE NNNNNNNNSS 240 SDLMLDFEMD EQLLSELLNA DFSLLNNFDN GAASDTNTVC EHPQLSPDSQ KTLLVLDDAM 300 QEIRFPSMDS LIESGEFDWL EDLGNNGAAE EEEV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	15	25	RARERERERKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	4e-61	MYB family protein