PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679629.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 610aa MW: 67146.7 Da PI: 8.5973

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679629.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.4	7.8e-09	495	543	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_021679629.1 495 AWTLSEVMKLVEGVSRYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 543 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 610 aa Download sequence
MEVKGLLIDE KSEMHIVADI GQPIGCISNE GSSSGMLLQL ESSEGLSQFE NTEVDPDKLN 60 ARLEYIEEML QKVKEEERLR LACGSRDYSS AYVIVDSQCS DQLDKLPGID ENLQSEIPLQ 120 ETVPSFTPSL IDSHLHQSGS IDECSNTPVL TEGGALPSTT VTTSKPDFSK LNGEICLDNL 180 SIKELHETFK ATFGRETTVK DKQWLKRRIT MGLTNSCDVS ATTFIIKDNK LVKKGKEDGC 240 DNVDGALAYN LAVGTTINCS QQGAPISHGS QLEDQVVSDK RNRSTGDNSG SEDHHTEQRA 300 AKRVRKPTRR YIEELSEVES KESSGKLRTT VKSSAFGQMS SKFHFRPVRN VSSDGRTVVT 360 RLDSLGGSGI QIPCVSRVRR SRPRKNFMAL LKFNPNSMGM TATLVKKALG AHSFLPDNYE 420 SEKAQSAPAQ VQQRVRSVMY LFLGVPDKDK QFTAVGAVGG HHKVLKQVDS SGDSDDNIVT 480 VPTSKGGIRR KHHRAWTLSE VMKLVEGVSR YGAGRWSEIK RLAFASYSYR TSVDLKDKWR 540 NLLKASFAHI PSDKGVNSRK NAATMPIPEP ILLRVRELAE RQSQVPPNLT SGKEAGSSGS 600 SVHEKQSGYL

Sequence ? help Back to Top

Protein Sequence Length: 610 aa Download sequence

MEVKGLLIDE KSEMHIVADI GQPIGCISNE GSSSGMLLQL ESSEGLSQFE NTEVDPDKLN  60
ARLEYIEEML QKVKEEERLR LACGSRDYSS AYVIVDSQCS DQLDKLPGID ENLQSEIPLQ  120
ETVPSFTPSL IDSHLHQSGS IDECSNTPVL TEGGALPSTT VTTSKPDFSK LNGEICLDNL  180
SIKELHETFK ATFGRETTVK DKQWLKRRIT MGLTNSCDVS ATTFIIKDNK LVKKGKEDGC  240
DNVDGALAYN LAVGTTINCS QQGAPISHGS QLEDQVVSDK RNRSTGDNSG SEDHHTEQRA  300
AKRVRKPTRR YIEELSEVES KESSGKLRTT VKSSAFGQMS SKFHFRPVRN VSSDGRTVVT  360
RLDSLGGSGI QIPCVSRVRR SRPRKNFMAL LKFNPNSMGM TATLVKKALG AHSFLPDNYE  420
SEKAQSAPAQ VQQRVRSVMY LFLGVPDKDK QFTAVGAVGG HHKVLKQVDS SGDSDDNIVT  480
VPTSKGGIRR KHHRAWTLSE VMKLVEGVSR YGAGRWSEIK RLAFASYSYR TSVDLKDKWR  540
NLLKASFAHI PSDKGVNSRK NAATMPIPEP ILLRVRELAE RQSQVPPNLT SGKEAGSSGS  600
SVHEKQSGYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	379	385	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-109	MYB_related family protein