PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679609.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 668aa MW: 73409.6 Da PI: 7.3899

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679609.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	27.3	8.7e-09	553	601	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E +lv++v ++G g+W+ I r Rt ++k++w+++l XP_021679609.1 553 AWTLSEVMKLVEGVSRYGAGRWSEIKRLAFasySYRTSVDLKDKWRNLL 601 7**************************9999************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 668 aa Download sequence
METEVGVEGN DEGKFEEAGF GKTYSSLSST KQLTDPVVYK LVRVEGDGRL VPATDDEVME 60 VKGLLIDEKS EMHIVADIGQ PIGCISNEGS SSGMLLQLES SEGLSQFENT EVDPDKLNAR 120 LEYIEEMLQK VKEEERLRLA CGSRDYSSAY VIVDSQCSDQ LDKLPGIDEN LQSEIPLQET 180 VPSFTPSLID SHLHQSGSID ECSNTPVLTE GGALPSTTVT TSKPDFSKLN GEICLDNLSI 240 KELHETFKAT FGRETTVKDK QWLKRRITMG LTNSCDVSAT TFIIKDNKLV KKGKEDGCDN 300 VDGALAYNLA VGTTINCSQQ GAPISHGSQL EDQVVSDKRN RSTGDNSGSE DHHTEQRAAK 360 RVRKPTRRYI EELSEVESKE SSGKLRTTVK SSAFGQMSSK FHFRPVRNVS SDGRTVVTRL 420 DSLGGSGIQI PCVSRVRRSR PRKNFMALLK FNPNSMGMTA TLVKKALGAH SFLPDNYESE 480 KAQSAPAQVQ QRVRSVMYLF LGVPDKDKQF TAVGAVGGHH KVLKQVDSSG DSDDNIVTVP 540 TSKGGIRRKH HRAWTLSEVM KLVEGVSRYG AGRWSEIKRL AFASYSYRTS VDLKDKWRNL 600 LKASFAHIPS DKGVNSRKNA ATMPIPEPIL LRVRELAERQ SQVPPNLTSG KEAGSSGSSV 660 HEKQSGYL

Sequence ? help Back to Top

Protein Sequence Length: 668 aa Download sequence

METEVGVEGN DEGKFEEAGF GKTYSSLSST KQLTDPVVYK LVRVEGDGRL VPATDDEVME  60
VKGLLIDEKS EMHIVADIGQ PIGCISNEGS SSGMLLQLES SEGLSQFENT EVDPDKLNAR  120
LEYIEEMLQK VKEEERLRLA CGSRDYSSAY VIVDSQCSDQ LDKLPGIDEN LQSEIPLQET  180
VPSFTPSLID SHLHQSGSID ECSNTPVLTE GGALPSTTVT TSKPDFSKLN GEICLDNLSI  240
KELHETFKAT FGRETTVKDK QWLKRRITMG LTNSCDVSAT TFIIKDNKLV KKGKEDGCDN  300
VDGALAYNLA VGTTINCSQQ GAPISHGSQL EDQVVSDKRN RSTGDNSGSE DHHTEQRAAK  360
RVRKPTRRYI EELSEVESKE SSGKLRTTVK SSAFGQMSSK FHFRPVRNVS SDGRTVVTRL  420
DSLGGSGIQI PCVSRVRRSR PRKNFMALLK FNPNSMGMTA TLVKKALGAH SFLPDNYESE  480
KAQSAPAQVQ QRVRSVMYLF LGVPDKDKQF TAVGAVGGHH KVLKQVDSSG DSDDNIVTVP  540
TSKGGIRRKH HRAWTLSEVM KLVEGVSRYG AGRWSEIKRL AFASYSYRTS VDLKDKWRNL  600
LKASFAHIPS DKGVNSRKNA ATMPIPEPIL LRVRELAERQ SQVPPNLTSG KEAGSSGSSV  660
HEKQSGYL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	437	443	RRSRPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-123	MYB_related family protein