PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679249.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Protein Properties

Length: 677aa MW: 75504.2 Da PI: 6.6093

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679249.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	59.7	5.2e-19	538	634	2	95
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.sef 90 +kvl++sdv+++gr+vlpkk ae++ +++ + ++ + +ed ++ +W++++++ ++ks++y+l+ ++ +Fv+ ngL+egDf+v++ ++ +++ XP_021679249.1 538 QKVLKQSDVGNLGRIVLPKKEAETNlpELEARDGISIAMEDiGTSCVWNMRYRFwpNNKSRMYLLE-NTGDFVRTNGLQEGDFIVIY--SDvKCG 629 79***********************999999****7777***99777777777777.******************..555999 PP ..EEE CS B3 91 elvvk 95 +++++ XP_021679249.1 630 KYLIR 634 88776 PP

Sequence ? help Back to Top
Protein Sequence Length: 677 aa Download sequence
MDAMEEERAI ADEEREIWLE REQDNLLDVN DSSIFYADFP PLPDFPCMSA SSSSSSTPAP 60 LKAMAPSSSS SSSSSSAASW AVLKSDAEED AEKKNYDQQH YHHHHSKYDQ VEAPTADLSS 120 TASMDMMETF GYLDLIENNG FLDNPSIFQP AEHFLDEFQQ EQNAQPEQEP QQGNEELIMQ 180 TKIEETQQQG AAAPDDLAMV FLEWLKSNKE TVSAEDLRKV KIKKATIECA AKRLGGGKEA 240 MKQLLQLILE WVKMNHLQKR RVKESSSNNL PYQCQDPLQN PSSNTNLNCN SIPPDQSTPC 300 FAQSPWIAPP PYVVDRATVM PGFSPMVGYM GDPFASGASN MAGHSYLPAP PSDYHMLDSA 360 QSWPSSQFAL ASPYTTFLDN NLQTVQAHHP VFTGYGNQYP CQCLPGQVGD RLMRLGSSAT 420 KEARKKRMAR QRRFLSHHRN HNHHNSQPNQ NHPNQGADHH ARLGNDNVAP TAQPNPGNWV 480 YWPAAGAVSN TPVLPVDVQP AHVVDRPAMQ PHQSHHRQVA SDRRQGWKPE KNLRFLLQKV 540 LKQSDVGNLG RIVLPKKEAE TNLPELEARD GISIAMEDIG TSCVWNMRYR FWPNNKSRMY 600 LLENTGDFVR TNGLQEGDFI VIYSDVKCGK YLIRGVKVRK PGSKPENKKS GKSHRNLHAS 660 SPAAALNGSS STPTNQA

Sequence ? help Back to Top

Protein Sequence Length: 677 aa Download sequence

MDAMEEERAI ADEEREIWLE REQDNLLDVN DSSIFYADFP PLPDFPCMSA SSSSSSTPAP  60
LKAMAPSSSS SSSSSSAASW AVLKSDAEED AEKKNYDQQH YHHHHSKYDQ VEAPTADLSS  120
TASMDMMETF GYLDLIENNG FLDNPSIFQP AEHFLDEFQQ EQNAQPEQEP QQGNEELIMQ  180
TKIEETQQQG AAAPDDLAMV FLEWLKSNKE TVSAEDLRKV KIKKATIECA AKRLGGGKEA  240
MKQLLQLILE WVKMNHLQKR RVKESSSNNL PYQCQDPLQN PSSNTNLNCN SIPPDQSTPC  300
FAQSPWIAPP PYVVDRATVM PGFSPMVGYM GDPFASGASN MAGHSYLPAP PSDYHMLDSA  360
QSWPSSQFAL ASPYTTFLDN NLQTVQAHHP VFTGYGNQYP CQCLPGQVGD RLMRLGSSAT  420
KEARKKRMAR QRRFLSHHRN HNHHNSQPNQ NHPNQGADHH ARLGNDNVAP TAQPNPGNWV  480
YWPAAGAVSN TPVLPVDVQP AHVVDRPAMQ PHQSHHRQVA SDRRQGWKPE KNLRFLLQKV  540
LKQSDVGNLG RIVLPKKEAE TNLPELEARD GISIAMEDIG TSCVWNMRYR FWPNNKSRMY  600
LLENTGDFVR TNGLQEGDFI VIYSDVKCGK YLIRGVKVRK PGSKPENKKS GKSHRNLHAS  660
SPAAALNGSS STPTNQA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24650.1	1e-161	B3 family protein