PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021679170.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | LBD | ||||||||
Protein Properties | Length: 284aa MW: 31980.4 Da PI: 5.895 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 126 | 1.8e-39 | 10 | 110 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 aCaaCk++rrkC+++C+l pyfp +qp+ f+n+hklFG+++++kll++++ ++re+am+s++y+A++r r Pv+G+ g+i +l+ q++q+++el+ XP_021679170.1 10 ACAACKYQRRKCSSECPLKPYFPPDQPQLFQNAHKLFGVKKITKLLDNIDASQREEAMRSVIYQANVRDRFPVHGCWGIICQLHYQIRQAEEELH 104 7********************************************************************************************** PP DUF260 96 llkeel 101 +++++l XP_021679170.1 105 AVHAQL 110 **9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MTLKGGTSQA CAACKYQRRK CSSECPLKPY FPPDQPQLFQ NAHKLFGVKK ITKLLDNIDA 60 SQREEAMRSV IYQANVRDRF PVHGCWGIIC QLHYQIRQAE EELHAVHAQL EMYRQHQQHQ 120 ISSLTDDVPS QLQLGMAPPS NALSLFGHTT SQPYNALPVS QQHSYSNSSN PGYSSGYLDS 180 KDQLGNSMWV QHPYATTNNN NTNPMAIQSQ LVASQPLAIQ QEVDYDEIHP FFDTIDDRQS 240 YIDSKEAYES SSEESFKDTT QSIEHVAENE LKSAAACFSL TSVN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47870.1 | 3e-52 | LBD family protein |