PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021679136.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 356aa MW: 39660.9 Da PI: 9.7009

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021679136.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	67.5	2.6e-21	41	132	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqlea 87 +W+++e+ aLi+a+ +++ +lrrg+lk+++W+ev++++ + ++++qC++k+e+l+kry+ + +++++ s+ ss++++f++++a XP_021679136.1 41 CWSHDETVALIDAYCDKWYTLRRGNLKANHWQEVAEAVarrcPAASPPKTAVQCRHKMEKLRKRYRTEIQRARSMpVSRFSSSWVHFKRMDA 132 8*******************************999966556667799*********************9789**********85 PP

Sequence ? help Back to Top
Protein Sequence Length: 356 aa Download sequence
MSAPTAESPS PLDSTLPSNP LPALPAPPQP STNPRRLPPP CWSHDETVAL IDAYCDKWYT 60 LRRGNLKANH WQEVAEAVAR RCPAASPPKT AVQCRHKMEK LRKRYRTEIQ RARSMPVSRF 120 SSSWVHFKRM DAMEKGPQAK VDYNSESDGD DNEDENEDDD ENQGFYMENH RNVSTIMNTR 180 SIHKLYRNGI GGNTGSNVSG SGSGASVAGG FRIRIPTGVS IAQPGPKFYP KVDHKYGLNP 240 NLSSNSSPKP NFGAGSVSAS GLGSSKVLRG SDETGKKRER EPMEEMVTAI KVLGDGFVKM 300 EQMKMEMARE IETMRMEMEM KRTEMILESQ QRIVEAFAKA FSEKKKKPKR IPSPES

Sequence ? help Back to Top

Protein Sequence Length: 356 aa Download sequence

MSAPTAESPS PLDSTLPSNP LPALPAPPQP STNPRRLPPP CWSHDETVAL IDAYCDKWYT  60
LRRGNLKANH WQEVAEAVAR RCPAASPPKT AVQCRHKMEK LRKRYRTEIQ RARSMPVSRF  120
SSSWVHFKRM DAMEKGPQAK VDYNSESDGD DNEDENEDDD ENQGFYMENH RNVSTIMNTR  180
SIHKLYRNGI GGNTGSNVSG SGSGASVAGG FRIRIPTGVS IAQPGPKFYP KVDHKYGLNP  240
NLSSNSSPKP NFGAGSVSAS GLGSSKVLRG SDETGKKRER EPMEEMVTAI KVLGDGFVKM  300
EQMKMEMARE IETMRMEMEM KRTEMILESQ QRIVEAFAKA FSEKKKKPKR IPSPES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	3e-69	Trihelix family protein