PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021678888.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | HD-ZIP | ||||||||
Protein Properties | Length: 240aa MW: 27734 Da PI: 5.1379 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 60.7 | 2.3e-19 | 32 | 86 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 r++++f++eq++ Le++Fe+++ + a+++ +LAk+lgL+ +qV +WFqN+Ra++k XP_021678888.1 32 RNKRRFSDEQVKSLESMFESESRLEARKKLQLAKELGLQPKQVAIWFQNKRARWK 86 67889*************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 118.4 | 3.8e-38 | 33 | 124 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krr+s+eqvk+LE++Fe+e++Le ++K +la+eLglqp+qva+WFqn+RAR+k+kqlE+dy L+++y++l+++ e+L+ke+++L+ +l++ XP_021678888.1 33 NKRRFSDEQVKSLESMFESESRLEARKKLQLAKELGLQPKQVAIWFQNKRARWKSKQLERDYGILRANYNSLASRFETLKKEKQALAIQLQK 124 79*************************************************************************************99986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 240 aa Download sequence |
MMLDKVEYPP STQEPFFPNL DALAATRKKK NRNKRRFSDE QVKSLESMFE SESRLEARKK 60 LQLAKELGLQ PKQVAIWFQN KRARWKSKQL ERDYGILRAN YNSLASRFET LKKEKQALAI 120 QLQKLNDLMQ KPREEGEWCG QGVAVNSSEG ESENGDTKKC DSEAKPSLSF ERSAHGLGVP 180 SDEDDRIKVE YFGLEEEPNL MSIVEHADGS WTSQEDWRSL DSDGLFDQSN TGCQWWDFWA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G46680.1 | 4e-67 | HD-ZIP family protein |