PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678853.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 276aa MW: 31409.6 Da PI: 9.6711

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678853.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.4	9e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed ll ++++ G g+W++ +++ g+ R++k+c++rw +yl XP_021678853.1 14 RGPWTPREDTLLTKYIQARGEGNWRSLPKKAGLLRCGKSCRLRWMNYL 61 89****************************99**********97 PP
2	Myb_DNA-binding	52.3	1.3e-16	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++Ed+l+++ + +lG++ W++Ia +++ gRt++++k++w+++l XP_021678853.1 67 RGNITPDEDDLIIRMHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNTHL 112 7999****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MGRAPCCSKV GLHRGPWTPR EDTLLTKYIQ ARGEGNWRSL PKKAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI TPDEDDLIIR MHSLLGNRWS LIAGRLPGRT DNEIKNYWNT HLSKKLRSQG 120 TDPNTHKKLA EPVQQQGKKR KNNKSNSNNK KRKKNKAKVE PEKPKIHLPK PVRFSSLFLP 180 RNDSFEGNTS LSSCQGGEVG LSAEAVVDNP WCNLKDDDDG ISFLVDHDIV NSTDLECQTL 240 VPTANNNLEK LYEEYLQLLK TDDEQGQLDY SFAESL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	138	154	KKRKNNKSNSNNKKRKK
2	138	158	KKRKNNKSNSNNKKRKKNKAK
3	138	165	KKRKNNKSNSNNKKRKKNKAKVEPEKPK
4	139	155	KKRKNNKSNSNNKKRKK
5	150	154	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13540.1	9e-69	MYB family protein