PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021678815.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Trihelix

Protein Properties

Length: 572aa MW: 65041 Da PI: 6.5702

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021678815.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	94.7	9.1e-30	128	213	1	87
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 rW++qe+l+L+e+r++++++++++++k+plW+evs+ m +e+g++rs k+C+ek+enl k+ykk+keg+ +r ++ +++++f+qlea XP_021678815.1 128 RWPRQETLTLLEIRSRLDSKFKEANQKGPLWDEVSRIMsEEHGYQRSGKKCREKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 213 8***********************************999*************************98..55667*****85 PP
2	trihelix	68.7	1.1e-21	416	500	2	83
trihelix 2 WtkqevlaLiearremeerlrrg...klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfd 83 Wt+ ev L+++r++m++r++++ + +++lWe++s+km+ g+ers+ +Ckekw+++n++ +k+keg++k+++e+s+ c yf+ XP_021678815.1 416 WTEAEVTRLVQLRSNMGSRFQQNgcmEEEEALWEDISAKMACMGYERSALMCKEKWDSINNYTRKTKEGSNKKRKENSRGCCYFQ 500 *******************95444799*****************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 572 aa Download sequence
MEMEDQNHHN QYSIDLRQFI SGRPTHFPAI PQPPSAELFS AHRNLPPQAH HYDMMMLMSR 60 GGGLHDFHSD STTASCVLPP PPPPPPAPPA AAAANSGNTS VAAASATPTL SGLEAEVGSF 120 GGDGGTGRWP RQETLTLLEI RSRLDSKFKE ANQKGPLWDE VSRIMSEEHG YQRSGKKCRE 180 KFENLYKYYK KTKEGKAGRQ DGKHYRFFRQ LEALYGETNN PASFPETQFV GSSHRFHTGT 240 QANNEIFHSQ KLCNSHSLSN SSEFDTSSSE DNDLSTATLV ENDSTEKRRK RRDGKSWKAK 300 IKDFIDSQMR KLIERQEAWL EKLTKTMEQK EQERTFREEE WKKQEAARLD REQKFWAKER 360 AWIEARDAAL LETLRKLTGR ETNASSPEEL MRAHEIQNQR ENGIENGSER AQCDSWTEAE 420 VTRLVQLRSN MGSRFQQNGC MEEEEALWED ISAKMACMGY ERSALMCKEK WDSINNYTRK 480 TKEGSNKKRK ENSRGCCYFQ NNESIYNPGG DYCEINEQGP ETVRLQANEG CSPANSNAGN 540 AVSDSCFRYL MGDGGENLWE NYGLKLSKGD QN

Sequence ? help Back to Top

Protein Sequence Length: 572 aa Download sequence

MEMEDQNHHN QYSIDLRQFI SGRPTHFPAI PQPPSAELFS AHRNLPPQAH HYDMMMLMSR  60
GGGLHDFHSD STTASCVLPP PPPPPPAPPA AAAANSGNTS VAAASATPTL SGLEAEVGSF  120
GGDGGTGRWP RQETLTLLEI RSRLDSKFKE ANQKGPLWDE VSRIMSEEHG YQRSGKKCRE  180
KFENLYKYYK KTKEGKAGRQ DGKHYRFFRQ LEALYGETNN PASFPETQFV GSSHRFHTGT  240
QANNEIFHSQ KLCNSHSLSN SSEFDTSSSE DNDLSTATLV ENDSTEKRRK RRDGKSWKAK  300
IKDFIDSQMR KLIERQEAWL EKLTKTMEQK EQERTFREEE WKKQEAARLD REQKFWAKER  360
AWIEARDAAL LETLRKLTGR ETNASSPEEL MRAHEIQNQR ENGIENGSER AQCDSWTEAE  420
VTRLVQLRSN MGSRFQQNGC MEEEEALWED ISAKMACMGY ERSALMCKEK WDSINNYTRK  480
TKEGSNKKRK ENSRGCCYFQ NNESIYNPGG DYCEINEQGP ETVRLQANEG CSPANSNAGN  540
AVSDSCFRYL MGDGGENLWE NYGLKLSKGD QN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03680.1	1e-148	Trihelix family protein