PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021678755.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MYB | ||||||||
Protein Properties | Length: 319aa MW: 34521.7 Da PI: 9.0025 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 60.9 | 2.7e-19 | 13 | 58 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEde l ++v+ +G+++W++I++ ++ gR++k+c++rw + XP_021678755.1 13 KGPWSPEEDEALRRLVQNYGPRNWSLISKSIP-GRSGKSCRLRWCNQ 58 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 56.3 | 7.3e-18 | 67 | 109 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++eEde +++a++++G++ W+tIar ++ gRt++ +k++w++ XP_021678755.1 67 PFSPEEDETIIRAHARFGNK-WATIARLLN-GRTDNAIKNHWNST 109 89******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 319 aa Download sequence |
MASTARKDVD RIKGPWSPEE DEALRRLVQN YGPRNWSLIS KSIPGRSGKS CRLRWCNQLS 60 PEVEHRPFSP EEDETIIRAH ARFGNKWATI ARLLNGRTDN AIKNHWNSTL KRKCSSFTDD 120 LSDDADARQP LKRSASVGAG TNISGPVSSL HLNPSSPSGS DVSDSSLPGM SSSPVYRPLL 180 KTGSLVPPVL SIDAASSTTD PPTSLSLSLP GSDSCEASIQ VPNSGSGTGF NRGVNPIQDV 240 QTPVAPPTAA GVQQAPAAQR NGVGYERQFF SPEFLAVMQE MIRKEVRNYM SGIEQNGLCL 300 QTEAIRNAVV KRIGISRIE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37260.1 | 2e-74 | MYB family protein |