PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021678400.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 288aa MW: 33104.7 Da PI: 9.7198 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 98.9 | 2e-31 | 71 | 120 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+ XP_021678400.1 71 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 120 79***********************************************8 PP | |||||||
2 | K-box | 107.5 | 1.5e-35 | 139 | 235 | 4 | 100 |
K-box 4 ssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 s+ s++ea+++ +qqe++kL+++i+++q+ +Rh+lGe L++L++keL++Le +Lek+++++RskKne+l++++e++qk+e elq++n++Lr+k+ XP_021678400.1 139 SNPASASEANTQFYQQESSKLRRQIREIQNLNRHILGEALSTLTFKELKSLEGRLEKGISRVRSKKNEMLYAEVEYMQKREIELQNDNMYLRAKI 233 3444599***************************************************************************************9 PP K-box 99 ee 100 +e XP_021678400.1 234 AE 235 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 288 aa Download sequence |
MDCSRKPMNY LSSVMLKLLS LSFLVEAVST ISFFSIPSLF LYQLATTEFP NQEPDQGPSL 60 RKTGRGKIEI KRIENTTNRQ VTFCKRRNGL LKKAYELSVL CDAEVALIVF SSRGRLYEYA 120 NNSVRATIDR YKKASADSSN PASASEANTQ FYQQESSKLR RQIREIQNLN RHILGEALST 180 LTFKELKSLE GRLEKGISRV RSKKNEMLYA EVEYMQKREI ELQNDNMYLR AKIAENERAQ 240 QQQTNLMPSG SVYESVPSQA YDRNFIPVNL LEPNHHYSRP DHTALQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42830.1 | 1e-116 | MIKC_MADS family protein |