PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_021678174.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 311aa MW: 36111.3 Da PI: 4.6134 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 58.1 | 2.4e-18 | 38 | 125 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm......rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt+qe+ +Li+a++e++ +l+rg+lk+ +Weev+ + + ++ +qC++k+e+l+kr+++++++ + +++yfd +e XP_021678174.1 38 WTHQETVHLIQAYQEKWYSLKRGQLKASQWEEVAVTVaarcgyEYNHPAKTVIQCRHKMEKLRKRFREERRRISLT---GACSWQYFDLME 125 ***********************************99855554334446899******************999983...3446*****997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 311 aa Download sequence |
MSTPSPSPSP PPPPEPPSQS PPSNPRPLST KKPQPVPWTH QETVHLIQAY QEKWYSLKRG 60 QLKASQWEEV AVTVAARCGY EYNHPAKTVI QCRHKMEKLR KRFREERRRI SLTGACSWQY 120 FDLMESLERG PMPISARPLA LLPPNDTGDE DDEDNEEAEV EVDEEEEEEE DYGYRSKSRS 180 INYILRKPTI VNRFAGSNSG FSREAVNKRK REEMVEEEYD DDDDDDDDEE GGRGDRRKGV 240 EMGLAGEIRA FAERIVGMER KKIEMMKETE KWRMEMENKR MEMILDSQRK IVSMISAAFG 300 SQDDLEMEQE F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G24860.1 | 5e-47 | Trihelix family protein |