PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021677927.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 351aa MW: 40062.6 Da PI: 6.5157

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021677927.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.7	0.00038	4	26	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C ksFs+ L H+r+H XP_021677927.1 4 HRCKLCFKSFSNGRALGGHMRSH 26 79********************9 PP
2	zf-C2H2	12.6	0.00041	222	244	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C C+k+F++ L H +H XP_021677927.1 222 YRCDTCKKVFKSYQALGGHRASH 244 9************9999998887 PP
3	zf-C2H2	12.8	0.00037	275	297	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C ++Fs+ L H r+H XP_021677927.1 275 HECPYCFRVFSSGQALGGHKRSH 297 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 351 aa Download sequence
MDMHRCKLCF KSFSNGRALG GHMRSHMLNL PFPPKPEKEK EQHPPIQPSE DTRSASFSEE 60 EAEEEEEDKS LCYGLRENPK RSIRLVDPEF SFAADAASVL QDRESETESS KNPTRRRSKR 120 TRKLLEHPYQ QHRQEQESNI KKINFSKFSK TESWAEAEPV SSISDTTAEE DVAFCLMMLS 180 RDKWKKMEQK EQDEEAEDEK SIEETDETDE FKSCKTRTRG KYRCDTCKKV FKSYQALGGH 240 RASHKKLKVY TPSKESNLES SNVGTSSSMA EKKIHECPYC FRVFSSGQAL GGHKRSHLTG 300 VAATPARSSS KIEDNLNLID LNLPAPIDDD DLSQIELSAV SDAEFVNHIK R

Sequence ? help Back to Top

Protein Sequence Length: 351 aa Download sequence

MDMHRCKLCF KSFSNGRALG GHMRSHMLNL PFPPKPEKEK EQHPPIQPSE DTRSASFSEE  60
EAEEEEEDKS LCYGLRENPK RSIRLVDPEF SFAADAASVL QDRESETESS KNPTRRRSKR  120
TRKLLEHPYQ QHRQEQESNI KKINFSKFSK TESWAEAEPV SSISDTTAEE DVAFCLMMLS  180
RDKWKKMEQK EQDEEAEDEK SIEETDETDE FKSCKTRTRG KYRCDTCKKV FKSYQALGGH  240
RASHKKLKVY TPSKESNLES SNVGTSSSMA EKKIHECPYC FRVFSSGQAL GGHKRSHLTG  300
VAATPARSSS KIEDNLNLID LNLPAPIDDD DLSQIELSAV SDAEFVNHIK R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	5e-48	C2H2 family protein