PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021677905.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 721aa    MW: 79027.2 Da    PI: 5.0893
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021677905.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS324.42.2e-993657205374
            GRAS   5 LlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                     + ++Ae +++g+  laq +Larl+++ + + g+p  R+a+yf+eAL+  l+       ++ +ps+ s+ + ++++ a+k fse+sPil+f+++t+
  XP_021677905.1 365 ICQAAELIETGNPVLAQGILARLNHQlSLSIGKPHMRAAFYFKEALQLLLHM-----NNTTNPSSVSTCSLISKIGAYKSFSEISPILQFANFTC 454
                     689**********************9455667****************9997.....7777888888888************************* PP

            GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlelee 193
                     Nqa+lea eg +r+H+iDfdi+ G+QW++L+q+La R++g psl+iT+++sp+s+++ el+ t+e+L+ fA+e+++pfe ++l  ++l++   ++
  XP_021677905.1 455 NQALLEACEGFDRIHVIDFDIGFGGQWASLMQELAMRDGGVPSLKITAFASPSSHDEVELSFTEENLRIFASEINMPFEVEILGLESLTSG-SWS 548
                     **********************************************************************************855555444.677 PP

            GRAS 194 L..rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                     L  rv++ E++aVnl +  ++ +  + s     +  L++vk+lsPkvvv +++ +d+++ +F++++ ++++ ys+l++slea    + ++ +k+E
  XP_021677905.1 549 LprRVSETEVIAVNLPIGPFSNY--PSS----LPVALRFVKQLSPKVVVSSDKGCDRTDLPFAHHVNHSIQSYSSLLESLEAV-NMNLDALQKIE 636
                     7778899**********888887..444....4559********************************************776.4567999**** PP

            GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     r+l+++ i+n+v  ++++      +   Wr+ + ++GF+p ++s++a++qa++l+++++++g++ve ++ slvl+W++++L+s+SaW+
  XP_021677905.1 637 RFLVQPGIENIVLGRHRH----PDRTPPWRSLFLQSGFTPFQFSNFAESQAECLVQRTPVRGFHVERRQSSLVLCWQRKELISASAWT 720
                     *************99998....88999************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    
MKAMPLPFED FQGTGVLDFS SSSSPDSLSQ LPPQNQPHQQ QKWQNSNTKE NCCYVGSEPT  60
SVLDARRSPS PPTSSSTLSS SQGGSNGGGG ASTENTTSAA AAVSGYPSVD TTTEKCGQLG  120
MEDWEGILPG SPSQEQSILR LIMGDVEDPT LGLNKLLQSG TASQDMEFNE GFGVVDQGFG  180
FEPMNSSSLV NSIDPSVHVT SSEFPLLSHN AKIGSVLSQN PSLVNPTSAG NLLLGMFQHQ  240
QLPPIEATEE KPQIFNPQVI TDQNPAQFGQ NPAMFLPLSY AQLQELHLLS PPPTKRLSSG  300
PIGANYEVPK VPFSDSKPDF FLQRQQQQQH QLQMLQQQRP AMMKQKIMTD ELAAQQLQQA  360
ILNPICQAAE LIETGNPVLA QGILARLNHQ LSLSIGKPHM RAAFYFKEAL QLLLHMNNTT  420
NPSSVSTCSL ISKIGAYKSF SEISPILQFA NFTCNQALLE ACEGFDRIHV IDFDIGFGGQ  480
WASLMQELAM RDGGVPSLKI TAFASPSSHD EVELSFTEEN LRIFASEINM PFEVEILGLE  540
SLTSGSWSLP RRVSETEVIA VNLPIGPFSN YPSSLPVALR FVKQLSPKVV VSSDKGCDRT  600
DLPFAHHVNH SIQSYSSLLE SLEAVNMNLD ALQKIERFLV QPGIENIVLG RHRHPDRTPP  660
WRSLFLQSGF TPFQFSNFAE SQAECLVQRT PVRGFHVERR QSSLVLCWQR KELISASAWT  720
C
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.11e-145GRAS family protein