PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021677407.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 511aa MW: 55521.3 Da PI: 4.6325

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021677407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.8	2.4e-18	33	80	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT Ed +lvd+v+++G g+W+++ ++ g+ R++k+c++rw ++l XP_021677407.1 33 KGPWTSAEDAILVDYVTKHGEGNWNAVQKHSGLSRCGKSCRLRWANHL 80 79******************************************9986 PP
2	Myb_DNA-binding	52.3	1.3e-16	86	129	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ +++++++++G++ W++ a++++ gRt++++k++w++ XP_021677407.1 86 KGAFTPEEERRIIELHAKMGNK-WARMAAELP-GRTDNEIKNYWNT 129 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 511 aa Download sequence
MSRMTNGGED DKRSKGRLDS PAVEEASNGP LKKGPWTSAE DAILVDYVTK HGEGNWNAVQ 60 KHSGLSRCGK SCRLRWANHL RPDLKKGAFT PEEERRIIEL HAKMGNKWAR MAAELPGRTD 120 NEIKNYWNTR IKRLQRAGLP IYPPEVCLQV LNGSQESQNI GTLQTTDTYG PDLIQTDPFE 180 IPEVEFENLG LNLPSYSPTV LDIPTSSALK QDIGSSHSNS FMFPTMHPHK RLRESQTIFP 240 SLDGSVSGGL SAFIQSTNYF SENITESAGI SSQYDSHTNT FRQPPLDVLP GSHALLNDNS 300 SSSEPLYGAM KLELPSLQYS ETQQDSWGTP TSPLPSLESV DTLILSPPNE QTQSECLSPR 360 SSGLLEAVLY ESQTKNSKKC SGHQTSDTSV APGDVEDCPL NPYETEWEVH VDPNSPLGHS 420 AASVFSACTP ISGSSSDEPG FDLKPETTNQ VSTSYVKEKE VLNQIDFMRP DVLLGSGCFA 480 LGGGCGGSAN DQPVRTNAAG ASLGDDIDNE G

Sequence ? help Back to Top

Protein Sequence Length: 511 aa Download sequence

MSRMTNGGED DKRSKGRLDS PAVEEASNGP LKKGPWTSAE DAILVDYVTK HGEGNWNAVQ  60
KHSGLSRCGK SCRLRWANHL RPDLKKGAFT PEEERRIIEL HAKMGNKWAR MAAELPGRTD  120
NEIKNYWNTR IKRLQRAGLP IYPPEVCLQV LNGSQESQNI GTLQTTDTYG PDLIQTDPFE  180
IPEVEFENLG LNLPSYSPTV LDIPTSSALK QDIGSSHSNS FMFPTMHPHK RLRESQTIFP  240
SLDGSVSGGL SAFIQSTNYF SENITESAGI SSQYDSHTNT FRQPPLDVLP GSHALLNDNS  300
SSSEPLYGAM KLELPSLQYS ETQQDSWGTP TSPLPSLESV DTLILSPPNE QTQSECLSPR  360
SSGLLEAVLY ESQTKNSKKC SGHQTSDTSV APGDVEDCPL NPYETEWEVH VDPNSPLGHS  420
AASVFSACTP ISGSSSDEPG FDLKPETTNQ VSTSYVKEKE VLNQIDFMRP DVLLGSGCFA  480
LGGGCGGSAN DQPVRTNAAG ASLGDDIDNE G

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06100.1	2e-99	MYB family protein