PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021676459.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | HSF | ||||||||
Protein Properties | Length: 405aa MW: 46252.3 Da PI: 4.6476 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 112.2 | 3.5e-35 | 14 | 105 | 2 | 102 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k+ye+++d+++++++sws++++sf+v+++ ef+k++Lp++Fkh+nf+SF+RQLn+YgF+k++ e+ weF ++ F +g+ +l+++ XP_021676459.1 14 FLSKTYEMVDDPSTDSVVSWSQSNKSFIVWNPPEFSKDLLPRFFKHNNFSSFIRQLNTYGFRKIDPEQ---------WEFGNEDFIRGQPHLMKN 99 9***************************************************************9998.........****************** PP XXXXXX CS HSF_DNA-bind 97 ikrkks 102 i+r+k XP_021676459.1 100 IHRRKP 105 ***985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
MDESQGSSNS LPPFLSKTYE MVDDPSTDSV VSWSQSNKSF IVWNPPEFSK DLLPRFFKHN 60 NFSSFIRQLN TYGFRKIDPE QWEFGNEDFI RGQPHLMKNI HRRKPVHSHS MQNLQGQGSN 120 PLTDSERQSL KDYIERLEEE KQVLVLDLQR HEQEKQGFEM QMQALKEKLQ QMERKQQTMV 180 SFVARVLQKP GLALDLMSQL EPGHDRKRRL PRIGYLYDEA SIEDNQMVTC QALARENADS 240 NSVALSNVEQ FEQLESTLRF WESIVNDVQT NIQSNSTLEL DESTSCAESL AISCVQFSAD 300 NRPKSPAIDM NSEPAVASAT ESDPPKEPAT GTAPVAAGVN DVFWEQFLTE NPGSTDTQEV 360 QSERKDSGDR KNEIKPSEQG TFWWNMRNVN NLAEQMGHLT PAERT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 205 | 210 | DRKRRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18880.1 | 1e-146 | HSF family protein |