PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676409.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB_related

Protein Properties

Length: 558aa MW: 62761.1 Da PI: 6.5084

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676409.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.9	1.1e-08	461	509	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 rWT+ E +l+++v + G g W+ I + + +Rt ++k++w+++l XP_021676409.1 461 RWTPSEVMKLIEGVSKCGVGKWTHIKKLLFsssSHRTSVNLKDKWRNLL 509 9**********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 558 aa Download sequence
MGTESKDALV DESASIFLYS HAEVDQDLSY LTTFEDEVTR LQQYLPEYKM DCFDGTIGFE 60 TFNSLKGFSI ESFSCAFDYD HINFDGDALD LYLAQEGEET KGNSNRLQVT NKKVLLGDFR 120 TDSACKETLG AEPADEAPNL SCGSCEKTSL GNVALKSHSP HFQERDCHAE ISNLSSSSET 180 VLESARDRDS LLLDKMTAQD LCQVFSRIFG CETSVKDKQW LKHRIAVGLQ NRGELVDSLN 240 LLESGETSKA DEEKAVVLLN AALSGSASDL TDTLENQLIS REKHVKRMRL ASCNSLKSVS 300 SPVREVGFCS VNKSNTADAL VTQKQTHWPT GICTKGLQEQ NSRYHHRKCR ASYKNARDEF 360 LNVKTQKQHC QKGIGTAQLS CQEESLKGSC VQVPLDLPVQ IGESTKDNHL VNDFDNCKDN 420 EVSVSDEDFD RETSSADSQI SEDDSVTRRK RARKRKQRHR RWTPSEVMKL IEGVSKCGVG 480 KWTHIKKLLF SSSSHRTSVN LKDKWRNLLK ASNNEMQKKR KVEQGETQLS HQLSESIWCQ 540 VRELAVIYSY PRESKSKV

Sequence ? help Back to Top

Protein Sequence Length: 558 aa Download sequence

MGTESKDALV DESASIFLYS HAEVDQDLSY LTTFEDEVTR LQQYLPEYKM DCFDGTIGFE  60
TFNSLKGFSI ESFSCAFDYD HINFDGDALD LYLAQEGEET KGNSNRLQVT NKKVLLGDFR  120
TDSACKETLG AEPADEAPNL SCGSCEKTSL GNVALKSHSP HFQERDCHAE ISNLSSSSET  180
VLESARDRDS LLLDKMTAQD LCQVFSRIFG CETSVKDKQW LKHRIAVGLQ NRGELVDSLN  240
LLESGETSKA DEEKAVVLLN AALSGSASDL TDTLENQLIS REKHVKRMRL ASCNSLKSVS  300
SPVREVGFCS VNKSNTADAL VTQKQTHWPT GICTKGLQEQ NSRYHHRKCR ASYKNARDEF  360
LNVKTQKQHC QKGIGTAQLS CQEESLKGSC VQVPLDLPVQ IGESTKDNHL VNDFDNCKDN  420
EVSVSDEDFD RETSSADSQI SEDDSVTRRK RARKRKQRHR RWTPSEVMKL IEGVSKCGVG  480
KWTHIKKLLF SSSSHRTSVN LKDKWRNLLK ASNNEMQKKR KVEQGETQLS HQLSESIWCQ  540
VRELAVIYSY PRESKSKV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	449	457	RKRARKRKQ
2	450	458	RKRARKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G17460.1	3e-20	MYB_related family protein