PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676391.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 556aa MW: 60854.1 Da PI: 6.6728

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676391.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.8	9.3e-09	363	410	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq XP_021676391.1 363 SHSLAERVRREKISERMKFLQDLVPGC----NKVTGKAVMLDEIINYVQSLQ 410 8***********************9....677***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 556 aa Download sequence
MEKEKLFLNE GANSTAAVPI WNPCSFGMEM QSNKLNCCSD QLPNCFFNPN WDSSMDQSDP 60 FASALSSIVS SPVTTSNAIP SSGGVGDPVM IRELIGRLGN ICNSGETSYI NNNSSTNTSC 120 YSTPLNSPPK LNISIMDSQI MGNLPILGNG IPDHPSLAPF LADPGFAERA ARYSCFGSRN 180 LASNESELSH RLMPRLEPGK LQRVSSNPSE KATGPQANVN VDGNSNSDKK FSRLSRSSTP 240 ENAEFGDSRD ESSVSEQIPG GKLSMKGLND SNSRKRKAIT KGKAKETPSS SLSASDSKVV 300 AEMDESKAKR SKSKEINGDE KDSTKVNEEE NSNQKQNKDN SKPPEPLKDY IHVRARRGQA 360 TDSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL 420 ATVNPRMDIS MEALLSKDIF QSRGSLSQNL YPLETSAALS FPYGYRSQQG IALPNGMFSN 480 GETQFSTNPL NAVLKRNQCM QLPALDGFGD APRQVSTFWE DDLQSVVQMG FGQNQLQQPQ 540 AFHDSNMPGA QMKVEL

Sequence ? help Back to Top

Protein Sequence Length: 556 aa Download sequence

MEKEKLFLNE GANSTAAVPI WNPCSFGMEM QSNKLNCCSD QLPNCFFNPN WDSSMDQSDP  60
FASALSSIVS SPVTTSNAIP SSGGVGDPVM IRELIGRLGN ICNSGETSYI NNNSSTNTSC  120
YSTPLNSPPK LNISIMDSQI MGNLPILGNG IPDHPSLAPF LADPGFAERA ARYSCFGSRN  180
LASNESELSH RLMPRLEPGK LQRVSSNPSE KATGPQANVN VDGNSNSDKK FSRLSRSSTP  240
ENAEFGDSRD ESSVSEQIPG GKLSMKGLND SNSRKRKAIT KGKAKETPSS SLSASDSKVV  300
AEMDESKAKR SKSKEINGDE KDSTKVNEEE NSNQKQNKDN SKPPEPLKDY IHVRARRGQA  360
TDSHSLAERV RREKISERMK FLQDLVPGCN KVTGKAVMLD EIINYVQSLQ RQVEFLSMKL  420
ATVNPRMDIS MEALLSKDIF QSRGSLSQNL YPLETSAALS FPYGYRSQQG IALPNGMFSN  480
GETQFSTNPL NAVLKRNQCM QLPALDGFGD APRQVSTFWE DDLQSVVQMG FGQNQLQQPQ  540
AFHDSNMPGA QMKVEL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G07340.1	6e-92	bHLH family protein