PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021676353.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 178aa MW: 20516 Da PI: 10.5155 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 68.7 | 5.3e-22 | 10 | 53 | 2 | 45 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgk 45 ++++ rqvtfskRr gi+KKA+EL +LC+a++a+++fs+ gk XP_021676353.1 10 MVKDSNSRQVTFSKRRSGIFKKAHELATLCAAQIAIVVFSPGGK 53 5789999**********************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MGRRKIEMKM VKDSNSRQVT FSKRRSGIFK KAHELATLCA AQIAIVVFSP GGKPFSFGHP 60 SVEPVVERFL NDKGKKSTKV YNFCRSEARL EKLNNQLLDL QRQLQFEKKK EQLLQKAMKA 120 NEIPNLEPLD EMSVDKLLKF KKALEELREK MKARVVEMEA SSSLLLLSKN CIQENNHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34440.1 | 1e-34 | M-type_MADS family protein |