PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021676293.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | bHLH | ||||||||
Protein Properties | Length: 239aa MW: 26840.1 Da PI: 7.0624 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.5 | 0.00028 | 190 | 225 | 14 | 54 |
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++++ Lr ++P a ++ +++L +Av+Y+ksL XP_021676293.1 190 QKMKKMVKALRGIVPGA-----DQMNTVTVLDEAVRYLKSL 225 67888889999999998.....79***************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MQSDQRFQAK KAVPHVANQR GNSYMHIPVA SSFAAALPPA ANHLMPVHGI EFQPSEVCPQ 60 NFIIFDQNHH RSQIMFHPTV AHKFSGSGLN MHTSYIQENF YRKEINDIER EISASLKEDS 120 EDIDMLLSLE EEEQDEYDEE EVSTARTYGN HGSNSPDSCS SYGSKPRKTG SSFQKSSGSC 180 SSCNSERKQQ KMKKMVKALR GIVPGADQMN TVTVLDEAVR YLKSLKVEVQ KLGVRNLKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G29950.1 | 5e-41 | bHLH family protein |