PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676202.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 349aa MW: 38637.2 Da PI: 6.5052

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676202.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.5e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEd +l+ +++q G+g +W + ++++g++R++k+c++rw++yl XP_021676202.1 14 RGPWSPEEDAKLKAYIEQNGTGgNWIALPQKIGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	37.5	5.4e-12	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +++eEd ++ + G++ W+ Ia+ ++ gRt++++k++w++ XP_021676202.1 69 GGFSEEEDNIICSLYISIGSR-WSIIAAQLP-GRTDNDIKNYWNT 111 569****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
MGRAPCCDKA NVKRGPWSPE EDAKLKAYIE QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN 60 YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK 120 QRKEQAARRA TLRQEINRES QSVMAPGGVL NQQTPNYYWP ELPSVNMPAM NPSQDSHFWD 180 QESLRSLLIK LGERFSDDQQ ELNIATVCPL DGSCTSTRDQ PYSSSMNVFS SSGASMNSTD 240 SPCSQLPNTN YAVNGAVGPS TYQGLDGFPV EPHELMYGNQ QQLEGLESLY GIMDMANGTN 300 GALSSGESTI WGNVSSLAYP QLVSGLETCL QSLPQNHSSF EVSSYFGQQ

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

MGRAPCCDKA NVKRGPWSPE EDAKLKAYIE QNGTGGNWIA LPQKIGLKRC GKSCRLRWLN  60
YLRPNIKHGG FSEEEDNIIC SLYISIGSRW SIIAAQLPGR TDNDIKNYWN TRLKKKLLGK  120
QRKEQAARRA TLRQEINRES QSVMAPGGVL NQQTPNYYWP ELPSVNMPAM NPSQDSHFWD  180
QESLRSLLIK LGERFSDDQQ ELNIATVCPL DGSCTSTRDQ PYSSSMNVFS SSGASMNSTD  240
SPCSQLPNTN YAVNGAVGPS TYQGLDGFPV EPHELMYGNQ QQLEGLESLY GIMDMANGTN  300
GALSSGESTI WGNVSSLAYP QLVSGLETCL QSLPQNHSSF EVSSYFGQQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G49690.1	2e-86	MYB family protein