PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021676052.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 399aa MW: 45843.7 Da PI: 5.0116

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021676052.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	43.2	7.1e-14	205	256	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++++k+L+ XP_021676052.1 205 QRMTHIAVERNRRRQMNDHLNSLRSLMPPS---YVQRGDQASIIGGAIDFVKELE 256 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 399 aa Download sequence
MEKLQGPFDP CFLGEHLDVE GLEQCFVNTE SLRFEEEETQ FSMPSLEDKM PFLQMLQEVE 60 YPPFLPLKEP NFQTLLKLQH LKRPWDVNTY TTETDTQIQA LELESCVTHD MADLHSPVKS 120 EAKDLQNPRS NFCLEDVSPE PNQRQTNSIG HFCKERNSVS SFPWTHPQTV LNETHFSNTS 180 PVVPKERRKR KRTRPTKNKE EVESQRMTHI AVERNRRRQM NDHLNSLRSL MPPSYVQRGD 240 QASIIGGAID FVKELEQLLQ SLEAQKRMRK TEEAVAAMDI SSNWLFTSQA ECNIQRENGD 300 CEEEAKVKRK SEAAEIEVTV IKNHVNLKIQ SERKTGQLLR AIVALDDLRL TVLHLNITTS 360 SETTVLYSFN LKIEDDCKLE AADEIAATVD DIFSIINGS

Sequence ? help Back to Top

Protein Sequence Length: 399 aa Download sequence

MEKLQGPFDP CFLGEHLDVE GLEQCFVNTE SLRFEEEETQ FSMPSLEDKM PFLQMLQEVE  60
YPPFLPLKEP NFQTLLKLQH LKRPWDVNTY TTETDTQIQA LELESCVTHD MADLHSPVKS  120
EAKDLQNPRS NFCLEDVSPE PNQRQTNSIG HFCKERNSVS SFPWTHPQTV LNETHFSNTS  180
PVVPKERRKR KRTRPTKNKE EVESQRMTHI AVERNRRRQM NDHLNSLRSL MPPSYVQRGD  240
QASIIGGAID FVKELEQLLQ SLEAQKRMRK TEEAVAAMDI SSNWLFTSQA ECNIQRENGD  300
CEEEAKVKRK SEAAEIEVTV IKNHVNLKIQ SERKTGQLLR AIVALDDLRL TVLHLNITTS  360
SETTVLYSFN LKIEDDCKLE AADEIAATVD DIFSIINGS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	187	192	RRKRKR
2	206	217	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G46810.1	2e-78	bHLH family protein