PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021675701.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 547aa    MW: 61300.4 Da    PI: 6.0618
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021675701.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS462.62.4e-1411775471374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l+++L+ cA+avs++dl +aq+l+ +l++++s +g+p+qRl ay++e+L arla+s+s++ykal+++e +   s+e l+++++++ev+P++kf++
  XP_021675701.1 177 LKHVLVVCAQAVSDNDLLKAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLASSGSSIYKALRCKEPA---SAELLSYMHILYEVCPYFKFGY 268
                     6899*****************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     + aN aI ea++ e+rvHiiDf+i+qG QW++L+qa+a+Rp+gpp++RiTg+++++s   +   l+ +g+rL+++Ae ++vpfef++ +a +  +
  XP_021675701.1 269 MSANGAIAEAMKDENRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAyaRGGGLSIVGKRLSRLAEIVKVPFEFHA-AAMSGCE 362
                     ******************************************************998899999************************.89999** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++e+L+v+pgEalaVn+++ lh+++desvs++++rd++L+lvkslsPkvv++veqe+++n++ F+ rfle+l+yy+a+f+s++++lpr+++eri
  XP_021675701.1 363 VQVENLDVRPGEALAVNFAFVLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETLNYYMAMFESIDVTLPRDHKERI 457
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +vE+++l+r++vn++aceg+er+erhe l+kWr+r+++aGF+p+pls+ +++++k+ll+++ +  yr+ee++g+l+lgW++r Lv+ +aW+
  XP_021675701.1 458 NVEQHCLARDVVNIIACEGTERVERHELLGKWRSRFRMAGFTPYPLSSLVNATIKTLLENYCD-KYRLEERDGALYLGWMNRDLVASCAWK 547
                     *************************************************************95.5*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    
MQASQQLGSK GMSSRLYYQP MQEVEAYCMP QFQTLDHQLC YSGSSHGTRL SILNSREQYC  60
TLESSSANHS YNIYNSPSTI SFSPNGSPVS QQESQSYPPD THHSPDNKCG SPISGSCVTD  120
DVHDFQNKLR ELENAMFGPD SDIIDSIEST LRNGTSLESP EMDSLRQIMD AISRRDLKHV  180
LVVCAQAVSD NDLLKAQWLM DELRQMVSVS GEPIQRLGAY MLEGLVARLA SSGSSIYKAL  240
RCKEPASAEL LSYMHILYEV CPYFKFGYMS ANGAIAEAMK DENRVHIIDF QIGQGSQWIT  300
LIQAFAARPG GPPHIRITGI DDSTSAYARG GGLSIVGKRL SRLAEIVKVP FEFHAAAMSG  360
CEVQVENLDV RPGEALAVNF AFVLHHMPDE SVSTQNHRDR LLRLVKSLSP KVVTLVEQES  420
NTNTAAFFPR FLETLNYYMA MFESIDVTLP RDHKERINVE QHCLARDVVN IIACEGTERV  480
ERHELLGKWR SRFRMAGFTP YPLSSLVNAT IKTLLENYCD KYRLEERDGA LYLGWMNRDL  540
VASCAWK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.10.0GRAS family protein