PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_021675625.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 242aa MW: 27634.5 Da PI: 8.6992 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.2 | 1.7e-31 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gk+ye+ XP_021675625.1 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKVYEFG 58 79**********************************************95 PP | |||||||
2 | K-box | 102.1 | 7.7e-34 | 81 | 170 | 10 | 99 |
K-box 10 eeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 e++++s++qe++kLk+++e+Lqr+qRhllGedL++Ls+keLq+Le+qLe +l R++K+++++eq+e+l+kke l e nk+L+ kle XP_021675625.1 81 IERETQSWYQEVTKLKAKYESLQRTQRHLLGEDLGPLSVKELQNLEKQLEGALALARQRKTQIMFEQMEDLRKKECHLGELNKQLKYKLE 170 46789*********************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence |
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKVYEFGSA 60 GITKTLERYQ RCCFTPQDNS IERETQSWYQ EVTKLKAKYE SLQRTQRHLL GEDLGPLSVK 120 ELQNLEKQLE GALALARQRK TQIMFEQMED LRKKECHLGE LNKQLKYKLE AEGQSLAIQD 180 LWNSGAADGN SNFALHPSQS NPLDCDPGPV LQIGYHHFVQ AEGSSVPRSM AIETNFMQGW 240 IL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45650.1 | 1e-115 | MIKC_MADS family protein |