PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021675561.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 300aa    MW: 31704.4 Da    PI: 7.8258
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021675561.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.86.7e-101255445
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                     WT e d+ + +a + +  +   +W++Ia+ ++ g+t +++k+++ 
   XP_021675561.1 12 WTREQDKAFENALATYAEDaldRWEKIAADVP-GKTQEEIKLHYE 55
                     ********************************.**********96 PP
2Myb_DNA-binding422.2e-13121165347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
   XP_021675561.1 121 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 165
                      6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MTVDGVGCSS LWTREQDKAF ENALATYAED ALDRWEKIAA DVPGKTQEEI KLHYELLVED  60
LNQIEAGCVP LPNYSFSEGS VSHAGDEGTS KKGGHLGHHN SESTHGNKAS RSDQERRKGI  120
AWTEDEHRLF LLGLDKYGKG DWRSISRNFV VTRTPTQVAS HAQKYFIRLN SMNKDRRRSS  180
IHDITSVGNG DISAPQGPIT GQTNGSAAGG SAGKASKQPL QHPAGPPGAG VGVYGPPSIG  240
QPIGGPLVSA VGTPVNLSAP AHMAFGVRAP VPGTVSGVVP GAPMSMGPMT YPMPPTTAHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-112MYB family protein