PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021675440.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 343aa MW: 38150.7 Da PI: 6.9456

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021675440.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.4	1.1e-12	165	212	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + h ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k+Lq XP_021675440.1 165 QDHIIAERKRREKLSQRFIALSAIVPGL-----KKMDKASVLGDAIKYLKQLQ 212 6799**********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MEISSISGLS ELEMEEPSFI DQWPMNSIDD LSILPLVAAF GENMQHSLSH HPSFNLKTSM 60 EISPTGIVRP SKQLKPNGFN SSKTTDYNLS NPQVAFSPNI LSFGNSTNQN QMGIVKPKEE 120 AVCSKSINTL PSDILASPGN QNYMFKACQG AKRISDNSSR HSQTQDHIIA ERKRREKLSQ 180 RFIALSAIVP GLKKMDKASV LGDAIKYLKQ LQDRVQTLEE QTKKKAMESV VIVKKSQLFC 240 EDESSSSDET FSKGPVDEPL PEIEARICDK EVLVRIHCEK RKGVLEKTIA EIEKLHLSVV 300 NSSVLTFGSS ALDVTIIAQM DMEFGMSVKD LVKNLHSAFK LFM

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MEISSISGLS ELEMEEPSFI DQWPMNSIDD LSILPLVAAF GENMQHSLSH HPSFNLKTSM  60
EISPTGIVRP SKQLKPNGFN SSKTTDYNLS NPQVAFSPNI LSFGNSTNQN QMGIVKPKEE  120
AVCSKSINTL PSDILASPGN QNYMFKACQG AKRISDNSSR HSQTQDHIIA ERKRREKLSQ  180
RFIALSAIVP GLKKMDKASV LGDAIKYLKQ LQDRVQTLEE QTKKKAMESV VIVKKSQLFC  240
EDESSSSDET FSKGPVDEPL PEIEARICDK EVLVRIHCEK RKGVLEKTIA EIEKLHLSVV  300
NSSVLTFGSS ALDVTIIAQM DMEFGMSVKD LVKNLHSAFK LFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	171	176	ERKRRE
2	172	177	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	5e-67	bHLH family protein