PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021675259.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 478aa    MW: 53906.1 Da    PI: 6.2051
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021675259.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS449.32.6e-137464701374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilkfs 94 
                     l++lLl+cA+ v++g+ e+a+  L+++s+las dgd+mqR+aayfteALa r+++  +++l +al+ +++s    see+ +++lf+e++P+lk++
  XP_021675259.1  46 LIHLLLACANQVAAGSVENANISLEQISHLASADGDTMQRIAAYFTEALADRILKkGWPGLHRALTFTKKS--LLSEEILVQRLFFELFPLLKLA 138
                     689***************************************************988******99999887..7********************* PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     ++++NqaI ea+ege++vHiiD++  +++QW+ Llq L++Rpegpp+lRiTg+++    +ke l +++ rL++ Ae+l++pf+fn+ ++++ledl
  XP_021675259.1 139 YVITNQAIIEAMEGEKMVHIIDLNSFEPAQWIDLLQMLSARPEGPPHLRITGIHE----QKEVLDQMALRLTEEAEKLDIPFQFNP-IVSKLEDL 228
                     *******************************************************....9**************************.7999**** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrll.............................................................desvsles. 222
                     ++e+Lrvk+gEalaV++vlqlh+ll                                                             +        
  XP_021675259.1 229 NIESLRVKTGEALAVSSVLQLHSLLasddemlkgnspsasknpnsshlqrvlqinknqrtlgellekdlvhvysaspdsalsplslA------Ps 317
                     *****************************************************************************9996643333......23 PP

            GRAS 223 .erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWr 316
                      +   +L+++++lsPk++v++eqe++hn+ +++er++eal+yy+alfd+le++++r s er+kvE++l+g+ei+n++aceg++r+erhe+lekW 
  XP_021675259.1 318 pKMGCFLSALWGLSPKLMVITEQESNHNGFTLMERVTEALNYYAALFDCLESTVSRVSVERQKVEKMLFGEEIKNIIACEGTNRKERHEKLEKWI 412
                     35677****************************************************************************************** PP

            GRAS 317 erleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                      rle aGF+ vpls++ + qa++ll+ ++ dgy+++ee+g+lv++W++rpL+s+SaWr
  XP_021675259.1 413 LRLELAGFGRVPLSYHGMLQASRLLQSYGYDGYKIKEENGCLVICWHSRPLFSISAWR 470
                     *********************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
MAQEDGASSV TSSPLQFFPW MSLSPGYGSQ YPWLRELKSE ERGLYLIHLL LACANQVAAG  60
SVENANISLE QISHLASADG DTMQRIAAYF TEALADRILK KGWPGLHRAL TFTKKSLLSE  120
EILVQRLFFE LFPLLKLAYV ITNQAIIEAM EGEKMVHIID LNSFEPAQWI DLLQMLSARP  180
EGPPHLRITG IHEQKEVLDQ MALRLTEEAE KLDIPFQFNP IVSKLEDLNI ESLRVKTGEA  240
LAVSSVLQLH SLLASDDEML KGNSPSASKN PNSSHLQRVL QINKNQRTLG ELLEKDLVHV  300
YSASPDSALS PLSLAPSPKM GCFLSALWGL SPKLMVITEQ ESNHNGFTLM ERVTEALNYY  360
AALFDCLEST VSRVSVERQK VEKMLFGEEI KNIIACEGTN RKERHEKLEK WILRLELAGF  420
GRVPLSYHGM LQASRLLQSY GYDGYKIKEE NGCLVICWHS RPLFSISAWR FRGMIERY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50420.10.0GRAS family protein