PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021675145.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Nin-like

Protein Properties

Length: 935aa MW: 103757 Da PI: 6.3548

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021675145.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	94.3	8.7e-30	614	665	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek i+l++l++yFs+++kdAA+++gvc+T+LKriCRq+GIkRWP+Rkik++ XP_021675145.1 614 AEKAITLQVLQQYFSGSLKDAARSIGVCPTTLKRICRQHGIKRWPSRKIKKV 665 5899**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 935 aa Download sequence
MEDSILSPST MLGVHADSAM EFDYMDKLLL EGCWLETIDG SEFCNPSTSS SAAFVDASFL 60 WPTSEINDGD LASSPTKRSN QEEEQISLLP RSSPLNEAHG RSLVNAHSLE QDIGSADRLG 120 NNITEGSEVS RRWWIGPRTN PGPKTSVRDR LVRALGHIKD FTKDNDILIQ IWVPVDKGGR 180 RVLTTHDQRF ALVPNCQRLA NYRDISTNYQ FSAEEDSKDM VGLPGRVFLG KIPEWTPDVR 240 FFRSDEYPRV DHAQQYDVRG TLALPVFEIG SSTCLGVIEV VTTRQKIKYH PELESVCKAL 300 KAVDLQSSEA PSLHHVKVCD MSYQAVLPEI HEVLRSACET HKLPLAQTWV PCIQQGKGGC 360 RHSDENYHRC VSTVDLACYV HDTGVQAFHE ACSEHHLLKG QGVAGEAFLT NQPCFSSDIT 420 SYGKTEYPLS HHARMFGLHA AVAIRLRSMH TGTADFVLEF FLPADCTDPE KQKKMLTSLS 480 LIIQQVCQSL RVVTEKELEE ETGLLITEVL APSDGRPPKE EMLRVAQPYS ESYGGDILSQ 540 TDCLTGIQRI GNHSLILKEK QKVLINKKLV DLRQNQEDYS LKVSVECGGD SAVAEGSFSS 600 ACMGKMGEKR RSKAEKAITL QVLQQYFSGS LKDAARSIGV CPTTLKRICR QHGIKRWPSR 660 KIKKVGHSLQ KLQLVIDSVQ GASGAFQIGS FYTNFPELAS PNLSRSNPFS TSKQSDHPEP 720 SSIQPEGGIL SSHVAAQKSP SSSCSQSSSS SHCCSSGIQQ NASAFTIPTS EEPVLGENSG 780 NSVLKRVRSD AELQASIQEE QNLLPRSQSH KSLSEQPILG NLPPLPKNGS LISQEIDAQR 840 VKVTYGNEKI RFRMPKSWEL KDLLLEIGRR FNIDDVHKYD LKYLDDDSEW ILLTCDDDLE 900 ECIDLCQSSQ SHTIKLLLQI SPHLLDRSMN SHGLS

Sequence ? help Back to Top

Protein Sequence Length: 935 aa Download sequence

MEDSILSPST MLGVHADSAM EFDYMDKLLL EGCWLETIDG SEFCNPSTSS SAAFVDASFL  60
WPTSEINDGD LASSPTKRSN QEEEQISLLP RSSPLNEAHG RSLVNAHSLE QDIGSADRLG  120
NNITEGSEVS RRWWIGPRTN PGPKTSVRDR LVRALGHIKD FTKDNDILIQ IWVPVDKGGR  180
RVLTTHDQRF ALVPNCQRLA NYRDISTNYQ FSAEEDSKDM VGLPGRVFLG KIPEWTPDVR  240
FFRSDEYPRV DHAQQYDVRG TLALPVFEIG SSTCLGVIEV VTTRQKIKYH PELESVCKAL  300
KAVDLQSSEA PSLHHVKVCD MSYQAVLPEI HEVLRSACET HKLPLAQTWV PCIQQGKGGC  360
RHSDENYHRC VSTVDLACYV HDTGVQAFHE ACSEHHLLKG QGVAGEAFLT NQPCFSSDIT  420
SYGKTEYPLS HHARMFGLHA AVAIRLRSMH TGTADFVLEF FLPADCTDPE KQKKMLTSLS  480
LIIQQVCQSL RVVTEKELEE ETGLLITEVL APSDGRPPKE EMLRVAQPYS ESYGGDILSQ  540
TDCLTGIQRI GNHSLILKEK QKVLINKKLV DLRQNQEDYS LKVSVECGGD SAVAEGSFSS  600
ACMGKMGEKR RSKAEKAITL QVLQQYFSGS LKDAARSIGV CPTTLKRICR QHGIKRWPSR  660
KIKKVGHSLQ KLQLVIDSVQ GASGAFQIGS FYTNFPELAS PNLSRSNPFS TSKQSDHPEP  720
SSIQPEGGIL SSHVAAQKSP SSSCSQSSSS SHCCSSGIQQ NASAFTIPTS EEPVLGENSG  780
NSVLKRVRSD AELQASIQEE QNLLPRSQSH KSLSEQPILG NLPPLPKNGS LISQEIDAQR  840
VKVTYGNEKI RFRMPKSWEL KDLLLEIGRR FNIDDVHKYD LKYLDDDSEW ILLTCDDDLE  900
ECIDLCQSSQ SHTIKLLLQI SPHLLDRSMN SHGLS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G20640.2	0.0	Nin-like family protein